XLOC_019456 (glulc)


Basic Information

Item Value
gene id XLOC_019456
gene name glulc
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 14768411 ~ 14775724 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00038359
GTCAGGCTGGATCATTTGGTCTTCATATGGAGTGGAGCCAATTCTACATCACAGAGTGCATTGCTTAGTGTAAATCTGATCCAGTATGTCTTGCGTATCCGACAGCTCCAGCCTCAACAAGGCCCTGCGACAGCAGTACCTCAGTCTGCCTCAGGGACCCTTCTGTCAGGTCACTTATATTTGGATCGATGGGTCTGGAGAGGGTCTGCGCAACAAGACTCGAACCATGGAATCGGAGCCAAAGAGCGTGGCTGATCTGCCAGAATGGACCTTTGATGGTTCCAGCACAGGTCAGTCTGAAGGACACAACAGTGACATGCTGCTGATTCCTGTGCGCATGTTCAGAGACCCTTTCCTCCTGGACCCAAATAAACTGGTGCTGTGTGAGGTGCTCAAGCACACCCGAGAACCTGCAGTTGTTCTCCTAGAGTCAAACCATCGTAACAAGTGCAACAAGGTCATGGAGAAGGTCAAAGGTCTTCAGCCTTGGTTTGGCATGGAGCAGGAATATACTCTTCTAGGAGTGGATGGACACCCTTATGGCTGGCCCAGACTTGGCTTTCCCAAACCACAAGGTCTATATTACTGCAGTGTTGGTGCAGACAGAGCCTTTGGCAGAGATATTGTGGACTGTCATTACAAAGCCTGTCTATATGCTGGCATCAAAATCACTGGAACTAATGCAGAGGTCATGCCCTCTCAGTGGGAGTACCAGGTGGGTCCATGTGAGGGAATTGAGATAGCAGATCATCTGTGGATGTCACGCTTTGTGCTGCACCGAGTGTGTGAAGATTTTGGAGTGGTGGCGACCTTGGATCCTAAACCCATGGTGGGAGACTGGAATGGAGCCGGCTGCCACATCAATGTGAGCACAGCATCCATGAGAGAGGAAGGAGGAATTGAGCACATTGAGAAAGCCATTGAGAAACTGAGTAGGCGACATGAAGAGCATATTCGGGTCTATGACCCACATGGTGGAGAAGATAACAAGCGTCGCCTCACGGGTCGTCATGAAACCTCCAGCATCCACGATTTCTCCGCAGGTGTTGCAAACCGTGGGGCCAGCATCCGCATCCCACGTCAGGTTGGTCAGGAGAAGTGTGGTTATTTCGAGGACCGCCGTCCTGCCGCCAACTGTGACCCATATGCCGTGACCTGCGAAATGGCTGTGACATGCATGCTAGACGATGTCCATGAATAACATACTTTAATAGATGCTTAGTGTGTTAGGTAGAGGGCTCGTTATTCTGGTGGATTTGTTGTAAAATGTCCTCGATGCATATTAGAATCGTCATCTGAAAAGAATCGAATGCTATATGACTTGCACGGCAGGCTTGATATGCCGTATGTTTAGTCATACACGTGAGTTTACCTGTTTTTCCGAACAATAAATTCATTCTCACCCAATCAGAATTTAAAGAATACACTCCAAGTTAATTGTCATAGCCTAGCAATGCAAATGAAGGAACAGGGTGTTCATGAAACTTCCAAGGGTCTGAATGttcacattttattaaaatgaagtaACAGTAATATGTTAAATATCAAGGGTTTTAGCGATTAAAATGAGaaactaaaacaaatgaaaacaa
>TCONS_00038360
CTTGCGTATCCGACAGCTCCAGCCTCAACAAGGCCCTGCGACAGCAGTACCTCAGTCTGCCTCAGGGACCCTTCTGTCAGGTCACTTATATTTGGATCGATGGGTCTGGAGAGGGTCTGCGCAACAAGACTCGAACCATGGAATCGGAGCCAAAGAGCGTGGCTGATCTGCCAGAATGGACCTTTGATGGTTCCAGCACAGGTCAGTCTGAAGGACACAACAGTGACATGCTGCTGATTCCTGTGCGCATGTTCAGAGACCCTTTCCTCCTGGACCCAAATAAACTGGTGCTGTGTGAGGTGCTCAAGCACACCCGAGAACCTGCAGAGTCAAACCATCGTAACAAGTGCAACAAGGTCATGGAGAAGGTCAAAGGTCTTCAGCCTTGGTTTGGCATGGAGCAGGAATATACTCTTCTAGGAGTGGATGGACACCCTTATGGCTGGCCCAGACTTGGCTTTCCCAAACCACAAGGTCTATATTACTGCAGTGTTGGTGCAGACAGAGCCTTTGGCAGAGATATTGTGGACTGTCATTACAAAGCCTGTCTATATGCTGGCATCAAAATCACTGGAACTAATGCAGAGGTCATGCCCTCTCAGTGGGAGTACCAGGTGGGTCCATGTGAGGGAATTGAGATAGCAGATCATCTGTGGATGTCACGCTTTGTGCTGCACCGAGTGTGTGAAGATTTTGGAGTGGTGGCGACCTTGGATCCTAAACCCATGGTGGGAGACTGGAATGGAGCCGGCTGCCACATCAATGTGAGCACAGCATCCATGAGAGAGGAAGGAGGAATTGAGCACATTGAGAAAGCCATTGAGAAACTGAGTAGGCGACATGAAGAGCATATTCGGGTCTATGACCCACATGGTGGAGAAGATAACAAGCGTCGCCTCACGGGTCGTCATGAAACCTCCAGCATCCACGATTTCTCCGCAGGTGTTGCAAACCGTGGGGCCAGCATCCGCATCCCACGTCAGGTTGGTCAGGAGAAGTGTGGTTATTTCGAGGACCGCCGTCCTGCCGCCAACTGTGACCCATATGCCGTGACCTGCGAAATGGCTGTGACATGCATGCTAGACGATGTCCATGAATAACATACTTTAATAGATGCTTAGTGTGTTAGGTAGAGGGCTCGTTATTCTGGTGGATTTGTTGTAAAATGTCCTCGATGCATATTAGAATCGTCATCTGAAAAGAATCGAATGCTATATGACTTGCACGGCAGGCTTGATATGCCGTATGTTTAGTCATACACGTGAGTTTACCTGTTTTTCCGAACAATAAATTCATTCTCACCCAATCAGAA

Function

symbol description
glulc Predicted to enable glutamate-ammonia ligase activity. Predicted to be involved in glutamine biosynthetic process. Predicted to act upstream of or within nitrogen compound metabolic process. Predicted to be active in cytoplasm. Is expressed in brain; kidney; liver; and neuromast.

GO:

id name namespace
GO:0006807 nitrogen compound metabolic process biological_process
GO:0006542 glutamine biosynthetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004356 glutamate-ammonia ligase activity molecular_function
GO:0016874 ligase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060929-540 Predicted to enable glutamate-ammonia ligase activity. Predicted to be involved in glutamine biosynthetic process. Predicted to act upstream of or within nitrogen compound metabolic process. Predicted to be active in cytoplasm. Is expressed in brain; kidney; liver; and neuromast.

Ensembl:

ensembl_id ENSDARG00000013227

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00038359 False 1592 mRNA 0.47 7 14768411 14775724
TCONS_00038360 True 1312 mRNA 0.50 6 14768590 14773692

Neighbor

gene id symbol gene type direction distance location
XLOC_019455 NA coding downstream 1855 14766080 ~ 14766556 (-)
XLOC_019454 NA coding downstream 2463 14764193 ~ 14765948 (-)
XLOC_019453 arrdc1b coding downstream 5467 14699693 ~ 14762944 (-)
XLOC_019452 ehmt1b coding downstream 76292 14644247 ~ 14692119 (-)
XLOC_019451 cacna1bb coding downstream 137571 14381227 ~ 14630840 (-)
XLOC_019457 si:dkey-11o18.5 coding upstream 8597 14784321 ~ 14803554 (-)
XLOC_019458 phpt1 coding upstream 30618 14806342 ~ 14815974 (-)
XLOC_019459 noc4l coding upstream 41549 14817273 ~ 14826066 (-)
XLOC_019460 pus1 coding upstream 50859 14826583 ~ 14832369 (-)
XLOC_019461 ulk1b coding upstream 63865 14839589 ~ 14878220 (-)
XLOC_019446 BX470221.1 non-coding downstream 899633 13868662 ~ 13868778 (-)
XLOC_019439 NA non-coding downstream 1480642 13284400 ~ 13287769 (-)
XLOC_019434 CR792457.1 non-coding downstream 1706637 13055886 ~ 13061774 (-)
XLOC_019464 NA non-coding upstream 524230 15299954 ~ 15318397 (-)
XLOC_019465 NA non-coding upstream 698732 15474456 ~ 15572656 (-)
XLOC_019467 NA non-coding upstream 1041626 15817350 ~ 15819871 (-)
XLOC_019468 NA non-coding upstream 1063854 15839578 ~ 15845578 (-)
XLOC_019473 NA non-coding upstream 1378856 16154580 ~ 16169064 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000006_10807071_10810100 GLULC coding CI01000006 null 10806082 ~ 10810201 (+)