XLOC_019627 (mettl27)


Basic Information

Item Value
gene id XLOC_019627
gene name mettl27
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 25795875 ~ 25801956 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00038647
atcTAACGTACTAGTGCTACTATCACAAGGCAGATGAATGAAGTCAGCCACAGGATGGCAAACACCAGCCGGACCTTTTCTGATGTTAGGAATGTGATTCTGTCGGCTCATAAAAACACAGAGGCCCAGGATAAGGTGGGCTTCTATGACACCTGGGCTGATAACTATGAGCAGgaTGTAGCTGTGCTGGATTACAGAGCCCCGTTGCTGGCAGCCGAGTGTGTGAGCTCGTTTTTCAACGATGACAGAGAGAAGGCCACTGTTCTGGATGTGGCCTGTGGAACAGGACTGGTCTCCAAACACTTGAAGAGAATGGGGTTTCGTCACTTCGATGGAGTAGATGGAAGTCTGAGGATGCTGGAGGGGGCAAAGAAAACAGGACTTTATAAGCAGCTTATGCATTGCATGCTGGGTCAAGACAGAATTCCTGTTAAAGCCGAAACGTATGATGTTGTTATAATTGTTGGAGCTCTAAGTGTTGGACAGGTGCCCTTGAAAGTCATTAGAGAGCTCTGGGATGCTACAAAACCAGGCGGTTATGTGTGCATGACTACAAGAGCCAACACTGATAACCAAAAGTACAAGGCTGAATTGGAGCAAATGATCAAAGCATTGGAAGAAGAGCAGAAATGGAGAAGTGTGGCTGTTGTTGAGGTGGAGGAGTGGGAGAGAGGCGTATCAGAACTGGACACCGGGTACATTCCAGGAGCCGTTTATCTGTATCAGAAAGGGTTTTTATAATTTTATGAGCACATGATTGCAACCAAACACTAAAACTTTTTAAAGGAATTCATAATCCACCAGCAGGTGGCGGTAGTTAATCAGAAACTGGacgaccacttgtttatttttgaaaGTTCTTTTGCTCCCCAGAGAAGCGCCTGAAATGTCAAAACCTGATCCATTAGTTTAACACACAACTATTTTCACTTCATAAACACTGAAACACACTGGgtacatttaaatatacatttgttcaGCCGAAGTGTATGAACCTAAAGGAATTTGTGAGAAATGTCTCAGGTGTATTATTACAAAGCTTTCGATCCCAGTTACATCTAACCTTTCAGTTTGCCACTCCTCGATACTCCgaccacaatttttttttggaGCCGCCATTTGCATTTGTGTCAAGTAAGTGACGTAAATAAACGAGAATCTGTTTCATCTTATTGACCGCAATTTCAATATCCAATTTGAAgatttgtattataaataaacacactCCAAAAGTTTAcacagtttaaaaataatttattagctTGCATTTCCGGAAACATGCAGCATCACAGTGTTTTCATTAAACAGACATTATAATGGCATAAAA
>TCONS_00038648
ACCAGCCGGACCTTTTCTGATGTTAGGAATGTGATTCTGTCGGCTCATAAAAACACAGAGGCCCAGGATAAGGTGGGCTTCTATGACACCTGGGCTGATAACTATGAGCAGgaTGTAGCTGTGCTGGATTACAGAGCCCCGTTGCTGGCAGCCGAGTGTGTGAGCTCGTTTTTCAACGATGACAGAGAGAAGGCCACTGTTCTGGATGTGGCCTGTGGAACAGGACTGGTCTCCAAACACGTAAGTATTGCTTCATTTGGATTCTGAGCCTGCAATGAGCCTCCTAAATCAAAGAGTAGTGTGATTTTATTTTCTCAATTGATAATTCTTCGAGGAAAGTTGAAGAGAATGGGGTTTCGTCACTTCGATGGAGTAGATGGAAGTCTGAGGATGCTGGAGGGGGCAAAGAAAACAGGACTTTATAAGCAGCTTATGCATTGCATGCTGGGTCAAGACAGAATTCCTGTTAAAGCCGAAACGTATGATGTTGTTATAATTGTTGGAGCTCTAAGTGTTGGACAGGTGCCCTTGAAAGTCATTAGAGAGCTCTGGGATGCTACAAAACCAGGCGGTTATGTGTGCATGACTACAAGAGCCAACACTGATAACCAAAAGTACAAGGCTGAATTGGAGCAAATGATCAAAGCATTGGAAGAAGAGCAGAAATGGAGAAGTGTGGCTGTTGTTGAGGTGGAGGAGTGGGAGAGAGGCGTATCAGAACTGGACACCGGGTACATTCCAGGAGCCGTTTATCTGTATCAGAAAGGGTTTTTATAATTTTATGAGCACATGATTGCAACCAAACACTAAAACTTTTTAAAGGAATTCATAATCCACCAGCAGGTGGCGGTAGTTAATCAGAAACTGGacgaccacttgtttatttttgaaaGTTCTTTT

Function

symbol description
mettl27 Predicted to enable methyltransferase activity. Orthologous to human METTL27 (methyltransferase like 27).

GO:

id name namespace
GO:0006744 ubiquinone biosynthetic process biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060421-5918 Predicted to enable methyltransferase activity. Orthologous to human METTL27 (methyltransferase like 27).

Ensembl:

ensembl_id ENSDARG00000069507

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00038647 False 1327 mRNA 0.42 6 25795875 25801956
TCONS_00038648 True 900 lncRNA 0.44 4 25796338 25799633

Neighbor

gene id symbol gene type direction distance location
XLOC_019626 zgc:112437 coding downstream 21270 25773530 ~ 25774605 (-)
XLOC_019625 cldnc coding downstream 39756 25754268 ~ 25756119 (-)
XLOC_019624 CR388166.2 coding downstream 46948 25747063 ~ 25748927 (-)
XLOC_019623 cldnh coding downstream 54464 25739295 ~ 25741411 (-)
XLOC_019622 abhd11 coding downstream 73041 25703078 ~ 25722834 (-)
XLOC_019628 sdf2 coding upstream 219540 26021496 ~ 26028205 (-)
XLOC_019629 rab34b coding upstream 260496 26062452 ~ 26071773 (-)
XLOC_019630 tlcd1 coding upstream 278259 26080215 ~ 26089964 (-)
XLOC_019631 nipal4 coding upstream 295776 26097732 ~ 26114886 (-)
XLOC_019632 gria1b coding upstream 350376 26152332 ~ 26250744 (-)
XLOC_019609 BX510938.1 non-coding downstream 417864 25376752 ~ 25378011 (-)
XLOC_019606 NA non-coding downstream 568987 25216390 ~ 25226888 (-)
XLOC_019603 NA non-coding downstream 1109660 24679050 ~ 24686215 (-)
XLOC_019600 CR936479.1 non-coding downstream 1885672 23845537 ~ 23910203 (-)
XLOC_019597 NA non-coding downstream 2641353 23146291 ~ 23154522 (-)
XLOC_019633 NA non-coding upstream 449420 26251376 ~ 26395308 (-)
XLOC_019640 NA non-coding upstream 799005 26600961 ~ 26603641 (-)
XLOC_019643 BX465841.1 non-coding upstream 899865 26701821 ~ 26701954 (-)
XLOC_019645 NA non-coding upstream 1018966 26820922 ~ 26825306 (-)
XLOC_019649 NA non-coding upstream 1386168 27188124 ~ 27191434 (-)

Expression


Co-expression Network