Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110532163 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 28862981 ~ 28882631 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: arpin isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110532163 | True | 705 | mRNA | 0.47 | 6 | 28862981 | 28882631 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520608 | LOC106573759 | coding | downstream | 20331 | 28835278 ~ 28842650 (-) |
| LOC110520584 | LOC106573758 | coding | downstream | 32034 | 28794166 ~ 28830947 (-) |
| hydin | hydin | coding | downstream | 125673 | 28663539 ~ 28737308 (-) |
| necab2 | LOC106573751 | coding | downstream | 201528 | 28535157 ~ 28661453 (-) |
| ranbp10 | LOC106560827 | coding | downstream | 524458 | 28294448 ~ 28338523 (-) |
| LOC118946030 | NA | coding | upstream | 489302 | 29371933 ~ 29380725 (-) |
| nr2f2 | LOC106573769 | coding | upstream | 780317 | 29662948 ~ 29672991 (-) |
| LOC118964375 | NA | coding | upstream | 1395624 | 30278255 ~ 30284238 (-) |
| chd2 | LOC106573776 | coding | upstream | 1420988 | 30303619 ~ 30336415 (-) |
| LOC110520865 | NA | coding | upstream | 1464124 | 30346755 ~ 30352648 (-) |
| G29409 | NA | non-coding | downstream | 220 | 28862257 ~ 28862761 (-) |
| G29376 | NA | non-coding | downstream | 28038 | 28833569 ~ 28834943 (-) |
| G29395 | NA | non-coding | downstream | 31490 | 28831269 ~ 28831491 (-) |
| G29380 | NA | non-coding | downstream | 96001 | 28765648 ~ 28766980 (-) |
| G29381 | NA | non-coding | downstream | 97438 | 28764298 ~ 28765543 (-) |
| G29603 | NA | non-coding | upstream | 15245 | 28897876 ~ 28898094 (-) |
| G29607 | NA | non-coding | upstream | 22832 | 28905463 ~ 28906336 (-) |
| G29665 | NA | non-coding | upstream | 112742 | 28995373 ~ 28995577 (-) |
| G29666 | NA | non-coding | upstream | 113332 | 28995963 ~ 28996162 (-) |
| G29668 | NA | non-coding | upstream | 116611 | 28999242 ~ 28999444 (-) |
| G29355 | NA | other | downstream | 158625 | 28703887 ~ 28704356 (-) |
| G28870 | NA | other | downstream | 796676 | 28057443 ~ 28066305 (-) |
| LOC110520292 | gnao1 | other | downstream | 1219861 | 27631001 ~ 27781768 (-) |
| G25117 | zfpm1 | other | downstream | 3580963 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 3581951 | 25280592 ~ 25281030 (-) |
| G29906 | mef2a | other | upstream | 397645 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 2249262 | 31131151 ~ 31132900 (-) |
| LOC110521048 | LOC100194695 | other | upstream | 2543492 | 31426123 ~ 31444964 (-) |
| G33386 | NA | other | upstream | 3102140 | 31984771 ~ 31989249 (-) |
| G35075 | LOC106573452 | other | upstream | 4224488 | 33107119 ~ 33108497 (-) |
