G29381


Basic Information

Item Value
gene id G29381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 28764298 ~ 28765543 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU33623
gaaaacttgattgctgatgTGCAAAACactttgggactgtatcaacagtggactagaGAAACAGATACAAAAATATACAGTCGTTTTTGAGTGGAATTTTCCTTAATGAAAGCAGTTGATACAATTACTTAAACAGCTTTACCTCATGATTGGTAGAAGCTATTCCCTTTCTGATTTCAGATTTGAAAAACAGAGAATTAGAGGAAGTTTTCatatgctctgcttttttgtCTAATTTGTTGGAACCTCGGTTACCGAAACACATGTACGTTTGATTGGTAGAATATAATTATTTCCTAATTTCAGTTTTGAATATCAGAAAAGCAGACTTAGATATTTCATGTGCTATGTTTTTTTCAAATTTGTTGGGAAAGTGGCCTGAGTAGCTGATTGTGTCAAAAGCGACATTGTTTACGCTGAATAGAATACGTCTTTATCAATAAAACGTCACAATAAGGTGCAGAGCGTTCAATTTTCCTGCTGGGGGGCAAGGAGACCCCCGGCTCCGgaattgttaaataaatgttaactaTTTGGCTGTAATGTCATCACCTCTTGAAGAGCATagtcagaactacacatttcCGATGATTCCATGCAAAACAATTACGCACATtttagctctatcatcagagttatacagcaagtaactgcATCCTTTTCATGGTCAGTGTTAGCTGATGTTTAATTTGCAAGCTATCGTACTGATATAAATGTTGTACAGTTGTCTACATAGTGTGTAAGTGGACCTAATGTAGTTTTTTTTCTCCAACCAACATAGTCCTACCTAGCGAAGTTAGCTAACGTTATCCCCttttcaacattgtttttaagaatgttaaatcaCGATTGCTGCTGACACATGATAGGCTACATTGACTGATGGACAACGTCaaattggttagctagctaataacacATCACGTCAATATGGCTAGTTAACGAGCTAACTTTCAGGGGATAAACTAGATGGCTATATCCAAATATTGTTTGATTTGCTTGCCATCTATAGGGGTGATGACAGTAGTCCAACTGACAACTTTACCACGACGAGGATTTACCGATCTAAAGCTCGTTCCAAAAGCCTAATTTCTGATGAAGCAAGGCTAAATGACACGTTGTttccttagctagctagccagctagctacttgCCAAATGGATAGGCTACCCTCATGTATCTGAACATACATGATCgattgatgtttactgatcatgaaaaaCATGCAGTTACTTTctatataact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33623 True 1246 lncRNA 0.52 1 28764298 28765543

Neighbor

gene id symbol gene type direction distance location
hydin hydin coding downstream 26990 28663539 ~ 28737308 (-)
necab2 LOC106573751 coding downstream 102845 28535157 ~ 28661453 (-)
ranbp10 LOC106560827 coding downstream 425775 28294448 ~ 28338523 (-)
ripor1 fam65a coding downstream 543469 28106386 ~ 28220829 (-)
ctcf ctcf coding downstream 658281 28098876 ~ 28106017 (-)
LOC110520584 LOC106573758 coding upstream 28623 28794166 ~ 28830947 (-)
LOC110520608 LOC106573759 coding upstream 69735 28835278 ~ 28842650 (-)
LOC110532163 NA coding upstream 97438 28862981 ~ 28882631 (-)
LOC118946030 NA coding upstream 606390 29371933 ~ 29380725 (-)
nr2f2 LOC106573769 coding upstream 897405 29662948 ~ 29672991 (-)
G29378 LOC106573754 non-coding downstream 635 28749977 ~ 28763663 (-)
G29384 NA non-coding downstream 14792 28748312 ~ 28749506 (-)
G29369 NA non-coding downstream 32566 28727410 ~ 28731732 (-)
G29365 NA non-coding downstream 45805 28718242 ~ 28718493 (-)
G29359 NA non-coding downstream 53033 28711005 ~ 28711265 (-)
G29380 NA non-coding upstream 105 28765648 ~ 28766980 (-)
G29395 NA non-coding upstream 65726 28831269 ~ 28831491 (-)
G29376 NA non-coding upstream 68026 28833569 ~ 28834943 (-)
G29409 NA non-coding upstream 96714 28862257 ~ 28862761 (-)
G29421 NA non-coding upstream 108029 28873572 ~ 28874071 (-)
G29355 NA other downstream 59942 28703887 ~ 28704356 (-)
G28870 NA other downstream 697993 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 1121178 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 3482280 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 3483268 25280592 ~ 25281030 (-)
G29906 mef2a other upstream 514733 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 2366350 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 2660580 31426123 ~ 31444964 (-)
G33386 NA other upstream 3219228 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 4341576 33107119 ~ 33108497 (-)

Expression


Co-expression Network