G29384


Basic Information

Item Value
gene id G29384
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 28748312 ~ 28749506 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU33626
GTTTAATTGTTTTCAATAGACTTCATGGACACATCTGTGTTTACAATCACAGTAGGAGAATCTGGTAGCAAGGAATTTCCAAAAGGCTTGGGTATTATCCTCAGTCAGGAGAACCAGAGCCCAGGGAGGAGCCATGTCTGTGCAGTAGGACTGAGGAGCATAGTAGTAATTATGGTAGTCTTACTTCTGCTGTACAGCCACTGCACTGCATGAAGCTGTTGCATGCACAACTCACTCAGCTTTAATGCCAATTACTAGGGCTTCGGTGATAGGATTCAGATGAATTAGAAATCCACACTGTAATCATATTTCATATGGCCCTGGAGGATTCAGTGATAAGGCTGAAATTCTTTGAGGACCAGAGCGTCCAACAAACATATTCCTTTACAATTATGAAACCGCATTTACCATGCAAATCTTAACACACTTGTTATGAGTGCTCATGTCAAGGGTAATGGTAGATCTGGTTTAGGCGACAGCTAGTcagtcttcctggggtccgacacattaaaaaaatacattacagacaaaaatactttacaatttacgTACATTCATTaccatttacatacatttaaacatCCTTGGACATGCAGATCGAGTTTCAAAGGTCAAGAATGACAGTGATCAACGCCTTATCTGTAGTGAGCTCAGAAATGAGGACACACCTTGCTGTAATAATGTGAGTTTCCATTGAGTGAGAGGCTACTGGCTGCAACTTATAAGTGGGCTTTAGTCCATGACTCTGTCTGGACTGAGCTGCCCTGGCTTTGTGGCACAGCGTCACAATATGATCCTTTGGCTAGTGGTGAAAATTGTCAATTTCCTCTGTTACTGAGAAATATGTCCAGTAAATCAACGCATCCACTACCTGGCAGTCTCACACTTCCTCTTATCTCCTCatgacatactgtgtgttttccTCTCAAGGCCACTGGTGAGCTTATTACTGTACACCCTCATTGAGAATAAAGCAGAGGAACTACACTGGCTCTAACACTGACTATGACACTCAATACAGAACAAAAAACACTCTGAAAAATCAATGTAATGTATCCTATTTCGTGCGTAACACCCACCAACCAGGATGGCTCATGAGAACATGTTTAGTGCAACAGACACCATTTAAATGTCACAAAGGCTCAATAACCCATAACTTTATATGGAATGTCAGCTAACATAATCTAAAATGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33626 True 1195 lncRNA 0.41 1 28748312 28749506

Neighbor

gene id symbol gene type direction distance location
hydin hydin coding downstream 11004 28663539 ~ 28737308 (-)
necab2 LOC106573751 coding downstream 86859 28535157 ~ 28661453 (-)
ranbp10 LOC106560827 coding downstream 409789 28294448 ~ 28338523 (-)
ripor1 fam65a coding downstream 527483 28106386 ~ 28220829 (-)
ctcf ctcf coding downstream 642295 28098876 ~ 28106017 (-)
LOC110520584 LOC106573758 coding upstream 44660 28794166 ~ 28830947 (-)
LOC110520608 LOC106573759 coding upstream 85772 28835278 ~ 28842650 (-)
LOC110532163 NA coding upstream 113475 28862981 ~ 28882631 (-)
LOC118946030 NA coding upstream 622427 29371933 ~ 29380725 (-)
nr2f2 LOC106573769 coding upstream 913442 29662948 ~ 29672991 (-)
G29369 NA non-coding downstream 16580 28727410 ~ 28731732 (-)
G29365 NA non-coding downstream 29819 28718242 ~ 28718493 (-)
G29359 NA non-coding downstream 37047 28711005 ~ 28711265 (-)
G29349 NA non-coding downstream 53988 28693916 ~ 28694324 (-)
G29095 NA non-coding downstream 248969 28499075 ~ 28499343 (-)
G29378 LOC106573754 non-coding upstream 471 28749977 ~ 28763663 (-)
G29381 NA non-coding upstream 14792 28764298 ~ 28765543 (-)
G29380 NA non-coding upstream 16142 28765648 ~ 28766980 (-)
G29395 NA non-coding upstream 81763 28831269 ~ 28831491 (-)
G29376 NA non-coding upstream 84063 28833569 ~ 28834943 (-)
G29355 NA other downstream 43956 28703887 ~ 28704356 (-)
G28870 NA other downstream 682007 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 1105192 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 3466294 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 3467282 25280592 ~ 25281030 (-)
G29906 mef2a other upstream 530770 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 2382387 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 2676617 31426123 ~ 31444964 (-)
G33386 NA other upstream 3235265 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 4357613 33107119 ~ 33108497 (-)

Expression


Co-expression Network