trnaa-ugc


Basic Information

Item Value
gene id trnaa-ugc
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59061807 ~ 59061880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc
gtcccatgtggctcagttggtagagcatggcacttgcaatgccagggttgtgggtttgatacccatgggggacc

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc True 74 mRNA 0.54 1 59061807 59061880

Neighbor

gene id symbol gene type direction distance location
fam160b1 fam160b1 coding upstream 223608 58808370 ~ 58838199 (+)
LOC110525578 NA coding upstream 1097984 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 1123819 57806134 ~ 57940604 (+)
LOC110525562 LOC106576893 coding upstream 1296409 57622267 ~ 57765398 (+)
LOC118964920 NA coding upstream 1339782 57694498 ~ 57722025 (+)
LOC110525756 NA coding downstream 148126 59210006 ~ 59212175 (+)
erlin1 LOC106576878 coding downstream 222444 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 278659 59340539 ~ 59342276 (+)
cxcf1a cxcf1a coding downstream 421601 59483481 ~ 59485882 (+)
cxcl12a cxcl12a coding downstream 527784 59589595 ~ 59631391 (+)
G64577 NA non-coding upstream 13548 59047544 ~ 59048259 (+)
G64440 NA non-coding upstream 199801 58858828 ~ 58862006 (+)
G64397 NA non-coding upstream 218758 58841159 ~ 58843049 (+)
G64394 NA non-coding upstream 220995 58840138 ~ 58840812 (+)
G64347 NA non-coding upstream 290773 58714329 ~ 58771034 (+)
G64645 LOC100196663 non-coding downstream 150561 59212441 ~ 59234565 (+)
G64716 NA non-coding downstream 210331 59272211 ~ 59272491 (+)
G64718 NA non-coding downstream 213365 59275245 ~ 59280313 (+)
G65432 NA non-coding downstream 242886 59304766 ~ 59304983 (+)
G65441 NA non-coding downstream 258924 59320804 ~ 59321015 (+)
G64338 NA other upstream 361428 58699296 ~ 58700379 (+)
G64315 NA other upstream 395901 58665334 ~ 58665906 (+)
G64292 NA other upstream 474222 58586858 ~ 58587585 (+)
G63959 fgfr2 other upstream 838677 58221522 ~ 58223130 (+)
G63958 NA other upstream 893629 58166565 ~ 58168178 (+)
G65442 NA other downstream 262756 59324636 ~ 59325129 (+)
G66188 NA other downstream 879606 59941486 ~ 59942064 (+)
G67806 LOC106581772 other downstream 2252994 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 2667885 61729765 ~ 61733388 (+)
G70011 NA other downstream 4213083 63274963 ~ 63275296 (+)

Expression


Co-expression Network