XLOC_019917 (med20)


Basic Information

Item Value
gene id XLOC_019917
gene name med20
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 558287 ~ 584610 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039732
ATGGGTGTAACGTGtgttTGTCAGGTGCCAGTGGCCGAGGGTAAGAGCGTCCAGCAGACGGTGGATCTTCTCCACAGGAAGCTGGAGCAGCTGGGAGCCGTAAAACAGGGGAACTTCTGGGTGGACTGTGAGACGTATCACGCTACGGGAAATGCCACCGGTCAGCCGTCAAAGCTGCTGTACGTGATGCACAACTCAGAGGCGCCACTGAGCTGCATGGCTCTGTTCGAGGGCGGACCGGGACTCAGCGCCGACGCAAACTTCGACGTCCTCATGATCAAACTCAAGAGTCACTTTCAGAATGCAAAAGGACACAAAGTGGAGAGTCGCGGCACTCGCTATCGCTACTGCGACTTTCTGGTGAAGATCGGCACTGTTGCCATGAGCTCCAGCGCACGAGGGATTTCAGTCGAGgtggagTACTGCGCGTGTGTGATTCCCGGCGACTGCTGGAACCTCATGAAGGAATTTATGCAAAGTTTTCTGGGCTCTAACACGCCCGAGCTGCCGACGGTGTTTACGAATAAAGCGGAGGGTCTGTACGTGCCGGTGGACTGCATGGACACCATGAGCCAATACCTGGAGCTCTTCAGTAAAGTGCGCAAACAGCAGGTCCTGCCAGGCAGCGGCGTACGCTAAAACTGAACAAACACTAGCGCACTGTGTGTCCTTATATAGAGAGAACTTTATATAAGCTATGTGATGAGAACATTTCTCATTTATTTCGATTGCAAGTTCTGCGAAATACATCTGTTCATGTGTTGTTTTTTATATAGCCAATTACTTCCTGTGTTTGACcttgttttttgtaaaataaactaattaattttgaattttactcctttatttattcaaaatcgACCAGTTTTTGAACATTTGTGTTTTCAGGTCCGCAAAACAGTGTTGTGTTGTATTGTAAACTAattggcaagaaaaaaaaaaacatacatcaaCGCATGGAAAATAGTGCTGCGCAAAATTTCAACACAATTAAAAATAGCATCCAAAATAGTTTGTTTCGAAGTAATGcaagtgtgtgtagtgtgtatttATTGTGTGTACATAAATACAAtcttgcatgtatatatatatacacacacacacacacatataccatacctacatatataaacacatatacacacatacacatgtatatacaaacatacatacacacatatacacatacacatgtatatacaaacatatatacacacatatacacacacacacacacacacacagtattatGTTGAAAcacttattttggatgtgattactCTTTGCACAAAGcactaataaaaaaagtttttctacTTTAAAAAATACCCAAAACGAGCACTGCTAATTATAACACTTTTCTTTCTTCATTTGTAATATCTATCTTGTAAACGGGTCAGATCATgcacattttggcctgttttacATGCTATTGTCCAGCAGATGgagatatttttattgtttgtgtttgaAACTAATGGTTTTGTGCATGTCCACTTCTTTCACGGCTAATAAATTATGGATGCTTCTCAAAAGTTAATCCCAAGATGACAAAATAGCTTACTGGTTCCTTTGCTTAAAGTAAACCAGGGTCTTTACGCTTCGGTGTTTGTAAAGGAGCATCACATTTGCATTTAACAAACGCAGAACAGATGAAGGAGCAGATGATTGGCTAGAAAAGACACTGTTTTGAATATGCATGAGCAGAACCCACGGTGGACGAGTTCCAGCTCGCTTTCTGTCTGTCCTATAGAAATCACGAGCCTAAaattagaacacacacacactacaccatTATACAGCACAAACAAGTGGAAAAGTATTCAATCCAATTTAAAGATGACCAGCTGACCAATCATGTAATATTCAGACTGTTAGTATACTTTTGAGACGCTAAACTGCGCAATAATGAATAcacaaatgcacaatatgtgcTAATGCAGTGAATATTCCCTCTCCAACACACATTTcgctcattattatttattattgacaCTCAATCTAGAGCTCGATTTGATTTGACCGCAGTTGCAGTGCATGCTGGGTAACACCCGGTGCTTTAGTATGCAGGCTACTTTACTATTATAAACGGGAAAGTCCATACTTGAGCAGTTTACACTCTTTTGATCgctttttattgtagtttttccATCCGTGGGGAAGTATTAATTGCTTATACACTCGTTTATATAAGTACACTTATATTTTTTAGTAAAACAATCAGAAAAGGCTGTGTTATAATGAAAAGCACAAGGTTAATCTGTCCATCTGACCCCGCCTCTGGAGCTTTAAAACCTGACGGACATCCGCACAGCCGATGAAAAGCCGGCTTATCTCCGTCACTGCGACCAATCAAAACCGGTTCTGCTGGTGATTGACGGCTCCTCGGCCAATCAGAGCGCAGTGATGCCGCGGTGGGCGAGTTCGGTTGCGTTGAAAATGGTGACAGCTCGCGCGTGCGGATGATGGCGGTAAATAACAGCCGAAAGCGAGCGTAAAAAAAGCACGCAAATATAAATCGCGATTAAACTAGGCAAGCGCGTTATACCGGCTGTTACGCGGAGGACTCGCACGGCGGAGCCGTTAAAAAGCCGGTCGGTGGGTTCCGGTGTGAGTTTATTATGTGTCTGCGGCTCTTGCTGGTTTTTGTTCTGCGGGTTTAAAGTAACAGATCTCTCGCGCcggtataaacacacacacagacacattaaCACACCGATCGAGCGCCGGTACCGGAACCTCCCGGATCCGCAGCTGCCGCGGGTTCCGCGTGTCTCCCGGCGGAGCGTCTTTTGTTCTGTGAGTAGCGCTAGCggttagcacacacacacacacacacacacactcaaacaacagacagacacacactcgTAACTCAGGAACACACACTCATATAAGTGTACACACACTGCATTGTGACACAAACACTCAAGACtctgcatatacacacacaaagaacTCTTGCTTGACTACAAGAACACACTACAATACACACATCATGTATATGTTCAGTATATAACATTTAATTCACACGTAGGGtgcatttacactagtgcgtttcaGAATCCCGTCCACACTGGCATGTTCAGATGATACTGGTAAAACACATCATGTTAGCATTCACACACAATAGGCAAGTGTGTATCTTGTTGTTGTCTAATGGTTACATATATTAGTCATGACCAGAGCTTGACGAATCAGGGATTCAATAGTCCAGAAGAATCAATCAGAGCACAATTGTGGATAGCCACGCCTCCAATTCAAGTCTACGAATTGATGCGTCTAAAACACTTTAACACGAAGACGCTGGAGTGACCTGAAGTCTGTATCTAGTCGACTACAAGACATGCATACAACGACATTTTTTAATGTCTACTGGCTGCGTATTTTAGTCATGATTGGAGCTTGACGAATTGAAGACGCTACATTCCTGAAGAACCAATCAGAGTGGTTAGCCACGCCCCTAATTTAAAAGTGCGATTTTATGAGTCTACACTAAAACGCAAACGCTTTTTCAGACTAAACGAAGTCTCAAGTGTTTTCACAATGAAGATGGCGGAGTTGCGTGAACGCAAGTGGCGTTTTTGTTGTCTGCTTGTTTATTAGTTAAATGACTGGAGGGAAAGATGCGCAGTAGTCTAGAAGAACCAATCAGAGCATGGTTATGGATAGCCACGCCTCCAGTTTAAAAATCTACGATCTACACTAAAACGTAACCACTTTTTCAGACTAAATGTTTTCAGTATTCAGTAAACGAAGATGTCGCAGTAGTGTGGACGCCAGGCGTGACTGTTATATAGCAAATTTTTTTAAACGAAAGCACACTAATGTAATCGTAGGCTCAGAATCAGCTCATTATACTCTATAATGAAAAACGTGATCACGATACTAGTATACGCAGTTTCCTTATCGCAGAAAGGTCCAGTAAGTTACATGCCAATCATTAGGTCGTTTATTCAGTTTTGACCAATTAGATGGAGACTTAATATCTTTATCCCCGCCTCCCCTGGAGGTGCTGATCTGTTATTGGCTTAAGCACCCAAAAGGCGAATGTAGAGCTGAAAAATAATAGCTAATCAGAGTCAGAATTTCCGTTTACGGGTTTTCATAGGGTTTATGAAATGCCTAAATATTTGCACAGACGTCATTGtttgatattatttttaatttgacgttgagatcagaaaaatgtttagcttataaaaagtttaaataaaaatagtttctCTAGGGAAATGGTAAATATCGTTTTTACTATGTCGTTTATTTTCCCAGTGTCATGCAGAAGATCGGACCATTAAAAGCCTGTGTGAATAATGTGTTTTTCGTTTGCAGTGTTTGATCCGCACGATGACGACCTATATTCTGAATAGCAGCAGGACGCGTCCGCTCTGATGCTACAACGCACCATTTCTCACAGTAAGTTCTTCAACCAATAATATCCAGCCGCAGACCTGCATGTTTCAGGCCACACTGGATTCAGACCACTAGATCAAAGGTCTTCAAGTAGGAGCGACTGACACCGC
>TCONS_00039733
gtgttTGTCAGGTGCCAGTGGCCGAGGGTAAGAGCGTCCAGCAGACGGTGGATCTTCTCCACAGGAAGCTGGAGCAGCTGGGAGCCGTAAAACAGGGGAACTTCTGGGTGGACTGTGAGACGTATCACGCTACGGGAAATGCCACCGGTCAGCCGTCAAAGCTGCTGTACGTGATGCACAACTCAGAGGCGCCACTGAGCTGCATGGCTCTGTTCGAGGGCGGACCGGGACTCAGCGCCGACGCAAACTTCGACGTCCTCATGATCAAACTCAAGAGTCACTTTCAGAATGCAAAAGGACACAAAGTGGAGAGTCGCGGCACTCGCTATCGCTACTGCGACTTTCTGGTGAAGATCGGCACTGTTGCCATGAGCTCCAGCGCACGAGGGATTTCAGTCGAGgtggagTACTGCGCGTGTGTGATTCCCGGCGACTGCTGGAACCTCATGAAGGAATTTATGCAAAGTTTTCTGGGCTCTAACACGCCCGAGCTGCCGACGGTGTTTACGAATAAAGCGGAGGGTCTGTACGTGCCGGTGGACTGCATGGACACCATGAGCCAATACCTGGAGCTCTTCAGTAAAGTGCGCAAACAGCAGGTCCTGCCAGGCAGCGGCGTACGCTAAAACTGAACAAACACTAGCGCACTGTGTGTCCTTATATAGAGAGAACTTTATATAAGCTATGTGATGAGAACATTTCTCATTTATTTCGATTGCAAGTTCTGCGAAATACATCTGTTCATGTGTTGTTTTTTATATAGCCAATTACTTCCTGTGTTTGACcttgttttttgtaaaataaactaattaattttgaa
>TCONS_00039734
TGTTTGATCCGCACGATGACGACCTATATTCTGAATAGCAGCAGGACGCGTCCGCTCTGATGCTACAACGCACCATTTCTCACAGATGAGCGAGGCCATGGCGTGTGGTTCCTGACTGCGACTGCACATGCGTGTTGGGAGGACCCATGGATCGCTGTAAGCACGTGGTGCGGTTCCGCCTGGGCCACGGCCACTCCATCCTCAACCCGCAGATGTGGCGCTGCGTGGACTGCGATACCACCGAGTCCGTGTGGGCCTGCCTGAAGTGCACGCACGTAGCCTGCGGACGCTACATGGAGGAGCACTCACGGAGCCACTACCAGCAGACTCAGCATCCGCTAGCCATGGATGTACGCGAGCTGGATGTCTTCTGCTTTGCGTGCGGAGATTACGTGTTGAACGATAACGTGGAGGGCGATCTCAAGCTCCTGCGGGGGGCGCTGTCCACCGTCCGCAGCCCTGGCCAGCGTTCCCTGCGTTCGTCAGTGACGGATGGCGGATTGAGAGTGTGTGAGATTACGCGAGACGGCGCGATGCAGACGGCGTTATGGCACCGGCGGAAAACTCTTCTCAAAAGCGCACTTCGCTACTGGATTAGCCGGCAACAGGAAGAGCACAGGAAGCGCGAGGAAAAACAAGAACAGGAGCGAGAGGAAAAACGACGCCAGCGTAAAGAAGTCAAAAAAAGACTGCTAGGAGAATTAGCCAATGTGCCGCCTAGAAAAAGTGCGCGATTGCTAACCCAGGCTCCGCGTCCAACAATCGCGCTAATACCACGGAAGTTCCGCGACCCTCCAGAGCGACTTCCTGCAGCGCCCAAACAGTTATTGACGCTATCTGCAAAGACTCTTTCGCGGAAACCGCTCCGCCGTACTGCACGCCTGCACCGCTATCATGCTTCACAATCTGCGCGACGCAGGAAACTAGCGCCCGGAGTTACAGGACTGCGCAATCTCGGGAATACATGCTACATGAACTCCATCCTACAGGTGCTCAGCCACTTGCAGAAGTTCCGGGAGTGTTTCCTGACGCTGGACCTGTGCGAGACGGAGGAGCTTCTGGCTAAAAGCAACCACCCTCAGGTGGGGGCTCTGTCTGCGGGtggcggcggcggcggcggcggTGTCCCATCCAGCCTGCAGTCAGCGGAGCAGAAGGAGCCGCGCTCCTCATCCCGCCAGCAGGTGTCGCTGTGCCACGAGCTGCACACGCTCTTCAGGGTGATGTGGTCGGGCCGCTGGTCGCTGGTGTCGCCCTTCGCCATGCTGCACTCCGTCTGGAACCTGATCCCTGCTTTTCGCGGGTACGACCAGCAGGACGCGCAGGAGTTCCTGTGCGAGCTCCTGGATAAAGTGCAGCAGGAACTGGAGTCGGACGCACCCCGCAAACACTTCCTGATCCCCATCACACAGCGCAAACTCTCCAAACAGGTCCTCAAAGTGCTCAACACCATCTTCCACGGACAGCTGCTCAGCCAGGTGACGTGTCTGTCCTGCAAGCGGAAGTCCAACACAGTGGAGCCGTTCTGGGATTTGTCTCTCGAGTTCCCAGAGCGGTACCACCGCATGGAGAAGCCCAGCGCCGCCGCCTGCCAGAGGAGCTGCTCGCTGTCCGAGATGCTGGCCAAGTTCACGGAGACCGAAGCTCTGGAGGGCTGCATTTACGCCTGTAACTTCTGCAACAGAAAGCGGCGTAAATCGTCCCACAAGCCGCTGTCACTGTCAGAGGCCTGCAAGCAGCTGCTGATCTGCAGATTACCTCAGGTGCTGCGGCTACACCTCAAACGCTTCCGgTGGTCGGGCAGGAACCACAGGGAGAAGATCGGTGTGCACGTGGCGTTTGATCAGGTGTTGAACATCCAGCCGTACTGCAGCTGCTCAGACGCCGCCGCGAGAGAGGCCTACACATACGACCTGTCTGCGGTCGTGATGCATCATGGGAAGGGCTTTGGCTCAGGGCACTACACAGCCTACTGCTACAACACTGAAGGAGgcttCTGGGTTCACTGTAATGACTCTGAGATGAACGTGTGCAGCGTGGAGGAGGTGTGCAGCACTCAGGCCTACATCCTCTTCTACACACAGCGCTCCTCCTAGAGCTCTCAATCTCTCTTGCTGCATCCCAGTTCTCACACTCGCACTACGTCCTAAAAGTTTGCTGTTTTGTGAAGAGAAAGTACATACTCTTCGGTGTGTAACAGAAGAGCTTTGGGTCAAACTACTTCCTCATTAGCGGAGCGTTCTGTTGCTTGGTTATGAGACCTGATGATCATCTCGACACCTCATCCACGGtttctgtcatttaattatttacagtttgtagattcagcagcaggttaatctggcATTAGAGAGTCTTTcctgcagagaaatctcctcaggtgtcacatatatacacattcaGGAGTGaagagcccctttcacacagtgataccgctaaatatctgtaaaattaccggaacgactttaccggtaagttAAAAAAGCACTGTAATGAAGGCAGGGATATTCTGGAATTTTTCCCGGAAAGACCGTTCACGCATCCATTCCAatataccggtaaattctgacatcattaaccggAAATGAGCTCTAAAACGGTTTCtcgactaacatctagcagctaaacgtgtctggaaaaatatacaaaggtttttatttttataaaccgcgcggacgcgaatgcatctgactgttctgattggctaaagcagacatctcacgtcagcacgttgtAAGCGTGcatggcaatcttccttctgcattcacacagtgcagcatttcAGCAAAtcaccggtaatgttacaacttctcttctcggaaaatagccagaacgaatttaccggtattttcagaatatttccagaaaggtctgtgtgtgtgaaaggggctaatgtccaagctagggatgctcatttcggtttaTTTTGACAACCGTCGCTCTTTAACTGAATATTAATGGTTAACTgttcagattaatattaaataataatttattaaaaaaataataagtaacgTGTCGATTTTGTGTGATATTAAATATTGCAATTGcaaatactgatttatttcataAGCATACATAAAACATCTTCACGCTGTCAATGTTGGTATAGttttaatattgaataatattgtGATAGTCTAGATTTGTAAAGCCATACAGCTCTGAATAACTTGAAACCGTGACCGCTAGTCTCTCCTAAAGATAAAGTTCTCCgtagtcgtcttgacaacacaaacactgcggTCACCTCAATGGAAACCCCGCATCTGCTTTCACTTGATTGTCGATGGCGCATGACGCCAACGACAAAACCCAGAGGCACGTGTAAGCAGCGCAAAACACTTGCGGCGTTACTAAACCATTCAACACGAAAAACGCGTTCGCTGATCGACCACTCATGCAGCCAAacttaacattttcaaaataaaatttaatcatttaactgatatcattaaatcaattaaaaacggttaatcggttattttgagcatccctagtccaaacacgtctttatagaAGCTCACATTGTTGctgcagattatatatatatatatatatatatatatatatatatacagaaaacCTGATTCAAATatgttccagttggctagatattaaatAAGTCAAACATCTTTACCGTAACCTCTTTAGTTGACGTTTAGTCTCAGCACGTCCaccatttttgtagtttttttattttttggctgtgaaggtcatcagtgcACTGAACTAACAGCTtgtgagtgtaaccacagatacaggaacactTGAGAGTTTTAAAACCtcaattcatcagcggatcgctcgtatgtgagcttatagacaaaccagctaatCTGTGGTAAAGctcagcggtgagttcggtgaactgatgtccttcacagccaatcagagtcatttCTGTGGAGCATGTGAACACTATGGCGAGTCGACGGTGCTTAAGTACACGCTCAAATGTtcgcaggaaatggacgtttttaaatctcagtatcgattggtaccgaattccagtatcgtgacaacactaatgCATATTGATATTCATGTGGCATGGAAGATGCAATATTGAGGTTGTAACGTTTAAGTCATAATTTCGAAAACATGAGATCGTTTCATCATCGATATTAATTaagtcattcaaacatctttacaGAAGCATCCAATTTGACGGTTAGTCTCCGCACGTCCcccatttttgtagttttttacactttttacccaagtttgtagttctaatcgaattcaagTCCAACACGCGGTGTATTGTGGGTAATATTAGCGGTTTGAGTATCTACACTTCAAATATTTACCAGAAATAGAGCATCCTTTGTCAAACCCAGTTTAACATGCTACAGTTTGGGACGTGCCAATTCTATTctcgaatactatttaggacgggTAGTAcgcgaattgggatgcagcatctctctctctctctctctctgagcctCAGAGACGCAGCGCCCTCTGCTGGCACACTTCAGGGCATTCaggaccaaacacacacacacacacacacacctgcaggtcCAGAAGAGCAGGAACACACACTGCTGAGAGACCGACAGCTGGCCAGAGAGAAACGCTACAGCAATACCATCATTATcatctcataaacacacacacacacacacacacacacacactctctctctctgaatcAGGAATTCTTCACCTTTGATACTGCGACTGTTTTCTACTCTTTCTATTCGGGATGAACATTCAGGAAAACAGAGGAAGCCTCTACATTTACGCCTGCGGTAAATGACCGAACAATCTAATGACGCTGAATGTCTTTGTGAGCGCGAGTATGTGTGAAAGGGTGTGACTGCTGACCTCTGACCCTTGACCTTTGTCCTGTATCGTGAGAGCACCTGTTATCAACTTTATTGATCTTGTGGGATCTTCCTGATGATagtgaataaagaaaaaaacatgaaacattcCGCTCGAGTGTGTTTTACTGTTGTCTTTAGAAAGATTTCAGTATTTTAGGTCAAGTGCTTCagcattttttcatatttataagtATTTTACGTGTGTTTAGTATTTAAATTATGAAGCATCAAGTATTTTATTAATTCTTTGAGTAAGTTTTTGTACTTCTTTAATAAGTTTCAGTATTATAGTAGGTGTTTAAGCTTGAGGATTTACACCCACCTAAAtgtaaatagtaacagttcctgactcctGTAAGCTACAAACTGGATATCATTGGAGAGAGCTCACTTTGAGCTTTACTCTGCTAAAGGGGAAGTTACATGcttcaaaatataaaaagttatacatcATGAAGTCATGAGAAAAAGACAATTGTATTGTTTAATATTAGTTTTCCATAtagaaacac
>TCONS_00039735
ATGGATCGCTGTAAGCACGTGGTGCGGTTCCGCCTGGGCCACGGCCACTCCATCCTCAACCCGCAGATGTGGCGCTGCGTGGACTGCGATACCACCGAGTCCGTGTGGGCCTGCCTGAAGTGCACGCACGTAGCCTGCGGACGCTACATGGAGGAGCACTCACGGAGCCACTACCAGCAGACTCAGCATCCGCTAGCCATGGATGTACGCGAGCTGGATGTCTTCTGCTTTGCGTGCGGAGATTACGTGTTGAACGATAACGTGGAGGGCGATCTCAAGCTCCTGCGGGGGGCGCTGTCCACCGTCCGCAGCCCTGGCCAGCGTTCCCTGCGTTCGTCAGTGACGGATGGCGGATTGAGAGTGTGTGAGATTACGCGAGACGGCGCGATGCAGACGGCGTTATGGCACCGGCGGAAAACTCTTCTCAAAAGCGCACTTCGCTACTGGATTAGCCGGCAACAGGAAGAGCACAGGAAGCGCGAGGAAAAACAAGAACAGGAGCGAGAGGAAAAACGACGCCAGCGTAAAGAAGTCAAAAAAAGACTGCTAGGAGAATTAGCCAATGTGCCGCCTAGAAAAAGTGCGCGATTGCTAACCCAGGCTCCGCGTCCAACAATCGCGCTAATACCACGGAAGTTCCGCGACCCTCCAGAGCGACTTCCTGCAGCGCCCAAACAGTTATTGACGCTATCTGCAAAGACTCTTTCGCGGAAACCGCTCCGCCGTACTGCACGCCTGCACCGCTATCATGCTTCACAATCTGCGCGACGCAGGAAACTAGCGCCCGGAGTTACAGGACTGCGCAATCTCGGGAATACATGCTACATGAACTCCATCCTACAGGTGCTCAGCCACTTGCAGAAGTTCCGGGAGTGTTTCCTGACGCTGGACCTGTGCGAGACGGAGGAGCTTCTGGCTAAAAGCAACCACCCTCAGGTGGGGGCTCTGTCTGCGGGtggcggcggcggcggcggcggTGTCCCATCCAGCCTGCAGTCAGCGGAGCAGAAGGAGCCGCGCTCCTCATCCCGCCAGCAGGTGTCGCTGTGCCACGAGCTGCACACGCTCTTCAGGGTGATGTGGTCGGGCCGCTGGTCGCTGGTGTCGCCCTTCGCCATGCTGCACTCCGTCTGGAACCTGATCCCTGCTTTTCGCGGGTACGACCAGCAGGACGCGCAGGAGTTCCTGTGCGAGCTCCTGGATAAAGTGCAGCAGGAACTGGAGTCGGACGCACCCCGCAAACACTTCCTGATCCCCATCACACAGCGCAAACTCTCCAAACAGGTCCTCAAAGTGCTCAACACCATCTTCCACGGACAGCTGCTCAGCCAGGTGACGTGTCTGTCCTGCAAGCGGAAGTCCAACACAGTGGAGCCGTTCTGGGATTTGTCTCTCGAGTTCCCAGAGCGGTACCACCGCATGGAGAAGCCCAGCGCCGCCGCCTGCCAGAGGAGCTGCTCGCTGTCCGAGATGCTGGCCAAGTTCACGGAGACCGAAGCTCTGGAGGGCTGCATTTACGCCTGTAACTTCTGCAACAGAAAGCGGCGTAAATCGTCCCACAAGCCGCTGTCACTGTCAGAGGCCTGCAAGCAGCTGCTGATCTGCAGATTACCTCAGGTGCTGCGGCTACACCTCAAACGCTTCCGgTGGTCGGGCAGGAACCACAGGGAGAAGATCGGTGTGCACGTGGCGTTTGATCAGGTGTTGAACATCCAGCCGTACTGCAGCTGCTCAGACGCCGCCGCGAGAGAGGCCTACACATACGACCTGTCTGCGGTCGTGATGCATCATGGGAAGGGCTTTGGCTCAGGGCACTACACAGCCTACTGCTACAACACTGAAGGAGgcttCTGGGTTCACTGTAATGACTCTGAGATGAACGTGTGCAGCGTGGAGGAGGTGTGCAGCACTCAGGCCTACATCCTCTTCTACACACAGCGCTCCTCCTAGAGCTCTCAATCTCTCTTGCTGCATCCCAGTTCTCACACTCGCACTACGTCCTAAAAGTTTGCTGTTTTGTGAAGAGAAAGTACATACTCTTCGGTGTGTAACAGAAGAGCTTTGGGTCAAACTACTTCCTCATTAGCGGAGCGTTCTGTTGCTTGGTTATGAGACCTGATGATCATCTCGACACCTCATCCACGGtttctgtcatttaattatttacagtttgtagattcagcagcaggttaatctggcATTAGAGAGTCTTTcctgcagagaaatctcctcaggtgtcacatatatacacattcaGGAGTGaagagcccctttcacacagtgata

Function

symbol description
med20 Predicted to enable transcription coactivator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED20 (mediator complex subunit 20).

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0016592 mediator complex cellular_component
GO:0003712 transcription coregulator activity molecular_function
GO:0003713 transcription coactivator activity molecular_function

KEGG:

id description
ko03021 Transcription machinery

ZFIN:

id description
ZDB-GENE-040801-104 Predicted to enable transcription coactivator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED20 (mediator complex subunit 20).
ZDB-GENE-050208-484 Predicted to enable thiol-dependent deubiquitinase and zinc ion binding activity. Predicted to act upstream of or within protein deubiquitination and ubiquitin-dependent protein catabolic process. Predicted to be active in cytoplasm. Orthologous to human USP49 (ubiquitin specific peptidase 49).

Ensembl:

ensembl_id ENSDARG00000000229 ENSDARG00000046006

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039732 False 4526 mRNA 0.42 4 558287 567923
TCONS_00039733 False 820 mRNA 0.50 3 560776 564230
TCONS_00039734 False 5353 mRNA 0.47 7 567733 584610
TCONS_00039735 True 2286 mRNA 0.57 6 569565 581689

Neighbor

gene id symbol gene type direction distance location
XLOC_019916 nuak2 coding upstream 22833 508290 ~ 535454 (+)
XLOC_019915 celsr2 coding upstream 89850 413349 ~ 468437 (+)
XLOC_019914 capzb coding upstream 147743 396840 ~ 410544 (+)
XLOC_019913 ora4 coding upstream 180051 374478 ~ 378236 (+)
XLOC_019912 CU914780.1 coding upstream 203001 344763 ~ 355286 (+)
XLOC_019918 pth4 coding downstream 51203 635813 ~ 637555 (+)
XLOC_019919 elf3 coding downstream 76895 661505 ~ 665371 (+)
XLOC_019920 gpr37l1a coding downstream 112321 696931 ~ 701105 (+)
XLOC_019921 zgc:162255 coding downstream 140029 724639 ~ 733339 (+)
XLOC_019922 znf76 coding downstream 152601 737211 ~ 753392 (+)
XLOC_019910 NA non-coding upstream 249083 240168 ~ 309204 (+)
XLOC_019909 NA non-coding upstream 271098 219167 ~ 287189 (+)
XLOC_019902 NA non-coding upstream 497919 51545 ~ 60368 (+)
XLOC_019903 NA non-coding upstream 501547 53914 ~ 56740 (+)
XLOC_019901 NA non-coding upstream 530443 24421 ~ 27844 (+)
XLOC_019924 NA non-coding downstream 226990 811600 ~ 817627 (+)
XLOC_019927 NA non-coding downstream 338901 923511 ~ 938827 (+)
XLOC_019938 CU570769.1 non-coding downstream 665178 1249788 ~ 1267820 (+)
XLOC_019944 NA non-coding downstream 732142 1316752 ~ 1364861 (+)
XLOC_019947 BX322657.1 non-coding downstream 792721 1377331 ~ 1384069 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000186_00433415_00435816 USP49 coding CI01000186 null 432833 ~ 435994 (-)
bowfin (Amia calva) AMCG00014029 usp49,LOC106583088 coding CM030125.1 CM030125.1 49717514 ~ 49728992 (+)