Gene
RNA
| Item | Value |
|---|---|
| gene id | G28949 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 28337676 ~ 28338209 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| translin-associated factor X-interacting protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU33141 | True | 534 | lncRNA | 0.44 | 1 | 28337676 | 28338209 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ripor1 | fam65a | coding | downstream | 116847 | 28106386 ~ 28220829 (-) |
| ctcf | ctcf | coding | downstream | 231659 | 28098876 ~ 28106017 (-) |
| LOC110532142 | carmil2 | coding | downstream | 247342 | 28038922 ~ 28090334 (-) |
| cfdp1 | cfdp1 | coding | downstream | 304131 | 27984849 ~ 28033545 (-) |
| LOC110520323 | LOC106573733 | coding | downstream | 359016 | 27850552 ~ 27978660 (-) |
| necab2 | LOC106573751 | coding | upstream | 196948 | 28535157 ~ 28661453 (-) |
| hydin | hydin | coding | upstream | 325330 | 28663539 ~ 28737308 (-) |
| LOC110520584 | LOC106573758 | coding | upstream | 455957 | 28794166 ~ 28830947 (-) |
| LOC110520608 | LOC106573759 | coding | upstream | 497069 | 28835278 ~ 28842650 (-) |
| LOC110532163 | NA | coding | upstream | 524772 | 28862981 ~ 28882631 (-) |
| G28858 | NA | non-coding | downstream | 317017 | 28020203 ~ 28020659 (-) |
| G28765 | NA | non-coding | downstream | 462022 | 27875407 ~ 27875654 (-) |
| G28764 | NA | non-coding | downstream | 462647 | 27874719 ~ 27875029 (-) |
| G28763 | NA | non-coding | downstream | 464617 | 27872817 ~ 27873059 (-) |
| G28749 | NA | non-coding | downstream | 492470 | 27844640 ~ 27845206 (-) |
| G29045 | NA | non-coding | upstream | 75234 | 28413443 ~ 28496850 (-) |
| G29095 | NA | non-coding | upstream | 160866 | 28499075 ~ 28499343 (-) |
| G29349 | NA | non-coding | upstream | 355707 | 28693916 ~ 28694324 (-) |
| G29359 | NA | non-coding | upstream | 372796 | 28711005 ~ 28711265 (-) |
| G29365 | NA | non-coding | upstream | 380033 | 28718242 ~ 28718493 (-) |
| G28870 | NA | other | downstream | 271371 | 28057443 ~ 28066305 (-) |
| LOC110520292 | gnao1 | other | downstream | 694556 | 27631001 ~ 27781768 (-) |
| G25117 | zfpm1 | other | downstream | 3055658 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 3056646 | 25280592 ~ 25281030 (-) |
| LOC110518671 | klhl36 | other | downstream | 3386289 | 24944908 ~ 24972465 (-) |
| G29355 | NA | other | upstream | 365678 | 28703887 ~ 28704356 (-) |
| G29906 | mef2a | other | upstream | 942067 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 2793684 | 31131151 ~ 31132900 (-) |
| LOC110521048 | LOC100194695 | other | upstream | 3087914 | 31426123 ~ 31444964 (-) |
| G33386 | NA | other | upstream | 3646562 | 31984771 ~ 31989249 (-) |
