XLOC_020138 (CABZ01065328.2)


Basic Information

Item Value
gene id XLOC_020138
gene name CABZ01065328.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 6905210 ~ 6914557 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040102
TGCTCACCTGAACTGATGGAGAAAATGTTTCAGatgtttgttttcttctttttgtgttGGTGCCGTCTGACTGGTGTGTCTGGTGTTGATGAAGTGAAGTCAGTGACGGAGGGAGATTCAGTCACTCTAAGCTCTGCTGTTACAAAGATACGAGAAGATgaagacatactgtggaaatatGGAGCTAAATTATCTCTGATTGCTGAAATCAGTAGAGCTTCTCGAATCTTCTCCACATATGATGATGTTCTTGATGGGAGTttcagagacagactgaagctggacaatcaaactggatctctgaccatcattAACATCACAACTGAACATGCTGGACGTTATGAACAACAGTTAAGCGGAGTAAAGTGGTCTTCAAAAACATTCAGAGTTTCTGTCTATGCTCTTCTGCCTGTTCCTGTCCTCAACTCTTCTCAGTGTTCATCATCACAGTATAATTGTTCAGTGctgtgttcagtggtgaatgtgaggtctgtgagtctctcctggtacaaaggaaacggtgtattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgaTCAACAACACCATCAGCAACCAGACCACACATATGGACATCAACACACTCTGCCAGCAATGTCCAGATGAggaacaatatttattttacctGGTGCTGATTTCTGCTGCTGGATCAGTGTTGATTGTCGTTGCAGTCAGCATGTACTACGTCTGCAAGAAACAAAGAAATACAGTCATGGCTCAGGAAGAAGACAGAACTCATTCAGCTTTGTGCAAACCATCAAGACGGGAAAAGAAATCTCAGACGGAGGCCGTGTATGAAAACGTCCGCAAGAAAAGAAATCAGAAACTGCAGGCTGCAGACTAAAACAATAATACCAAGCTGCTCTTTCGTTTGCAACTAAAATGTTCAGCTTTTTATGTTATGACATGTGaaattaaatagcattttattgTTGAATATTGACAATTTAGGGCATTTttcaatttgtattatttattatgcttTGCTGGAACCAcctagtttacttttattttggagtgcagattgcataagttttatttatatatttttaaacgtaTATGTAAACataactattattaattatttaaaattaaataatattaattattataagttatactaaatgtgtatatatataaactttttttaactaCTTTACCAAGTGTATATAATTTATAGgttatcagaattcggtacatacattcagtattacctttgcttgaaattaCCTGATCTAATCCCGTTTACAGTATATGACGTAAGTTTGCTCCCGAGCAGGTTTAACCTTCCAGGACTGTTGCTATGTGTTACGTCCCTAACTTAAATATGACTTGTGACCCAAATATAcctaacataaataaacaacggccaaagtgctccagctaaattatttgttaacataaccagcaaaacaatccaaattgacaagagatggggagcccaacaacttaataaagaacaaccaaacaaacctaaggcaggttggagctccccacaccaaacaaacatcaaatggaaagcataaaggagaacacaacaataaagccgTCAAAAACTGGTGGCGTGGAGGAATCGAGAGAAGTCCGCTTCCGTCTGGTTTAAAGGCCTGATGCCACCAAatcaaccaatagaaaactgaaaagggaAAAAGACAAACAAGATCACTTGAACATAATCATTAAGGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100301

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040102 True 1766 mRNA 0.38 6 6905210 6914557

Neighbor

gene id symbol gene type direction distance location
XLOC_020137 FO904898.5 coding upstream 11182 6892296 ~ 6894028 (+)
XLOC_020136 NA coding upstream 23932 6879741 ~ 6881278 (+)
XLOC_020135 NA coding upstream 31599 6870291 ~ 6873611 (+)
XLOC_020134 FO904898.2 coding upstream 45772 6858787 ~ 6859438 (+)
XLOC_020133 FO904898.3 coding upstream 50254 6843363 ~ 6854956 (+)
XLOC_020139 CU929149.1 coding downstream 28846 6943403 ~ 6949524 (+)
XLOC_020140 NA coding downstream 110905 7025462 ~ 7027516 (+)
XLOC_020141 NA coding downstream 118691 7033248 ~ 7067789 (+)
XLOC_020142 cela1.6 coding downstream 524629 7439186 ~ 7447391 (+)
XLOC_020143 NA coding downstream 537616 7452173 ~ 7452420 (+)
XLOC_020131 NA non-coding upstream 92338 6812149 ~ 6812872 (+)
XLOC_020123 NA non-coding upstream 200662 6570980 ~ 6704548 (+)
XLOC_020122 NA non-coding upstream 371196 6533698 ~ 6534014 (+)
XLOC_020149 NA non-coding downstream 631267 7545824 ~ 7556620 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000030_09579086_09594020 NA coding CI01000030 null 9579064 ~ 9594113 (-)