Gene
RNA
| Item | Value |
|---|---|
| gene id | G48715 |
| gene name | LOC106561448 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 44772501 ~ 44772990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU54437 | True | 286 | lncRNA | 0.57 | 2 | 44772501 | 44772990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523596 | LOC106573203 | coding | downstream | 52534 | 44712220 ~ 44719967 (-) |
| LOC110532336 | NA | coding | downstream | 64643 | 44691144 ~ 44707858 (-) |
| LOC118964636 | NA | coding | downstream | 352961 | 44418383 ~ 44419540 (-) |
| LOC110523486 | LOC106573197 | coding | downstream | 362883 | 44384962 ~ 44409618 (-) |
| LOC118959056 | NA | coding | downstream | 390276 | 44379708 ~ 44382225 (-) |
| lrrc29 | LOC106573211 | coding | upstream | 14147 | 44787137 ~ 44792832 (-) |
| LOC110523630 | LOC106561447 | coding | upstream | 20394 | 44793384 ~ 44810380 (-) |
| LOC118960022 | LOC106573206 | coding | upstream | 43995 | 44816985 ~ 44817541 (-) |
| mmp15a | LOC106573210 | coding | upstream | 48507 | 44821497 ~ 44835486 (-) |
| LOC110520774 | NA | coding | upstream | 127686 | 44900676 ~ 44901611 (-) |
| G48670 | NA | non-coding | downstream | 87342 | 44684910 ~ 44685159 (-) |
| G48666 | LOC106573200 | non-coding | downstream | 92115 | 44679750 ~ 44680386 (-) |
| G48655 | NA | non-coding | downstream | 110673 | 44661524 ~ 44661828 (-) |
| G48629 | LOC106586027 | non-coding | downstream | 140729 | 44626280 ~ 44631772 (-) |
| G48627 | NA | non-coding | downstream | 149544 | 44621619 ~ 44622957 (-) |
| G48728 | NA | non-coding | upstream | 55376 | 44828366 ~ 44828986 (-) |
| G48736 | NA | non-coding | upstream | 64486 | 44837476 ~ 44838859 (-) |
| G48738 | NA | non-coding | upstream | 67238 | 44840228 ~ 44840554 (-) |
| G48746 | NA | non-coding | upstream | 86731 | 44859721 ~ 44859990 (-) |
| G48779 | NA | non-coding | upstream | 129793 | 44902783 ~ 44903105 (-) |
| tspan9a | LOC106573177 | other | downstream | 1643472 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 5750476 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 6580765 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 6646776 | 38125280 ~ 38125725 (-) |
| G40079 | NA | other | downstream | 7055468 | 37716540 ~ 37717033 (-) |
| G49774 | NA | other | upstream | 947815 | 45720805 ~ 45721124 (-) |
| G49962 | NA | other | upstream | 1175968 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 2291784 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 2515949 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 2604651 | 47377641 ~ 47378543 (-) |
