Gene
RNA
| Item | Value |
|---|---|
| gene id | G48746 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 44859721 ~ 44859990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein VAC14 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU54468 | True | 199 | lncRNA | 0.50 | 2 | 44859721 | 44859990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mmp15a | LOC106573210 | coding | downstream | 24235 | 44821497 ~ 44835486 (-) |
| LOC118960022 | LOC106573206 | coding | downstream | 42180 | 44816985 ~ 44817541 (-) |
| LOC110523630 | LOC106561447 | coding | downstream | 49341 | 44793384 ~ 44810380 (-) |
| lrrc29 | LOC106573211 | coding | downstream | 66889 | 44787137 ~ 44792832 (-) |
| LOC110523596 | LOC106573203 | coding | downstream | 139754 | 44712220 ~ 44719967 (-) |
| LOC110520774 | NA | coding | upstream | 40686 | 44900676 ~ 44901611 (-) |
| LOC110523666 | LOC106573213 | coding | upstream | 255913 | 45115903 ~ 45142315 (-) |
| LOC110523718 | LOC106573216 | coding | upstream | 390024 | 45250014 ~ 45256049 (-) |
| LOC110523724 | LOC106573217 | coding | upstream | 397246 | 45257236 ~ 45299871 (-) |
| parvaa | LOC106573218 | coding | upstream | 444648 | 45304638 ~ 45321671 (-) |
| G48738 | NA | non-coding | downstream | 19167 | 44840228 ~ 44840554 (-) |
| G48736 | NA | non-coding | downstream | 20862 | 44837476 ~ 44838859 (-) |
| G48728 | NA | non-coding | downstream | 30735 | 44828366 ~ 44828986 (-) |
| G48715 | LOC106561448 | non-coding | downstream | 86731 | 44772501 ~ 44772990 (-) |
| G48670 | NA | non-coding | downstream | 174562 | 44684910 ~ 44685159 (-) |
| G48779 | NA | non-coding | upstream | 42793 | 44902783 ~ 44903105 (-) |
| G48894 | NA | non-coding | upstream | 202665 | 45062655 ~ 45062876 (-) |
| G48907 | NA | non-coding | upstream | 209434 | 45069424 ~ 45069679 (-) |
| G49489 | NA | non-coding | upstream | 338616 | 45198606 ~ 45198941 (-) |
| tspan9a | LOC106573177 | other | downstream | 1730692 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 5837696 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 6667985 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 6733996 | 38125280 ~ 38125725 (-) |
| G40079 | NA | other | downstream | 7142688 | 37716540 ~ 37717033 (-) |
| G49774 | NA | other | upstream | 860815 | 45720805 ~ 45721124 (-) |
| G49962 | NA | other | upstream | 1088968 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 2204784 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 2428949 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 2517651 | 47377641 ~ 47378543 (-) |
