Gene
RNA
| Item | Value |
|---|---|
| gene id | G49759 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 45699156 ~ 45699878 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU55595 | True | 351 | lncRNA | 0.50 | 3 | 45699156 | 45699878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523892 | LOC106573278 | coding | downstream | 18498 | 45632171 ~ 45680658 (-) |
| LOC110523834 | LOC106573224 | coding | downstream | 112075 | 45476653 ~ 45587081 (-) |
| LOC118964648 | NA | coding | downstream | 221315 | 45476653 ~ 45477841 (-) |
| LOC110523755 | NA | coding | downstream | 284492 | 45325909 ~ 45414664 (-) |
| parvaa | LOC106573218 | coding | downstream | 377485 | 45304638 ~ 45321671 (-) |
| LOC110523903 | LOC106573225 | coding | upstream | 30357 | 45730235 ~ 45867098 (-) |
| LOC110523913 | LOC106573227 | coding | upstream | 288068 | 45987946 ~ 46025205 (-) |
| LOC110523921 | LOC106573228 | coding | upstream | 325900 | 46025778 ~ 46076741 (-) |
| tcp11l1 | tcp11l1 | coding | upstream | 385704 | 46085582 ~ 46097107 (-) |
| LOC110524015 | LOC106573241 | coding | upstream | 1037557 | 46737435 ~ 46743033 (-) |
| G49619 | NA | non-coding | downstream | 219734 | 45476563 ~ 45479422 (-) |
| G49459 | LOC108441480 | non-coding | downstream | 247425 | 45435672 ~ 45451731 (-) |
| G49560 | NA | non-coding | downstream | 317018 | 45360643 ~ 45382138 (-) |
| G49556 | NA | non-coding | downstream | 339605 | 45339225 ~ 45359551 (-) |
| G49555 | NA | non-coding | downstream | 360006 | 45338855 ~ 45339150 (-) |
| G49777 | NA | non-coding | upstream | 24281 | 45724159 ~ 45724388 (-) |
| G49817 | NA | non-coding | upstream | 92274 | 45792152 ~ 45793197 (-) |
| G49872 | NA | non-coding | upstream | 179913 | 45879791 ~ 45880234 (-) |
| G49907 | NA | non-coding | upstream | 181192 | 45881070 ~ 45939772 (-) |
| G49931 | NA | non-coding | upstream | 209157 | 45909035 ~ 45921445 (-) |
| tspan9a | LOC106573177 | other | downstream | 2570127 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 6677131 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 7507420 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 7573431 | 38125280 ~ 38125725 (-) |
| G40079 | NA | other | downstream | 7982123 | 37716540 ~ 37717033 (-) |
| G49774 | NA | other | upstream | 20927 | 45720805 ~ 45721124 (-) |
| G49962 | NA | other | upstream | 249080 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 1364896 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 1589061 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 1677763 | 47377641 ~ 47378543 (-) |
