XLOC_020151


Basic Information

Item Value
gene id XLOC_020151
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7676352 ~ 7972344 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042045
ttaaaacagtTGTTAGAAAGCAAAACTAGAAACAATATTCGTCCACTAAACTTGAGGACAGAAAGTTTCAGTAAGTATTTGACATGTATTCATTATGAACATGCAGTCGTCAAAAATGACCAACAGATTCATCAATAAATCAAAGGCAATTTCACAACAGTGCGACGTCACTTCAGGAAGTGCTCGAGTTGAACAAGAGCTTTAGTTAAAGGCTAATTTAAGTGCTTCAACATAAATACAAAGTCCTTTATATACTAAATTTGACACGCAGATCAGATTTACATAAGGAAGATTCACTTCAGAACaacattttaaagcataataaaatGAGAGTGAAATAATAGActcaataatagtaaataatgaaaagtataaagtttaaatgaaaagtaaaatactgtaaataagaGTTACAGCTGATTAACTTCTTCAATAAACGTGTAACAATAATAGACTGAATAGAGGTCTGGCACTGATGGTCAAGATGTTTCTGAAATGTGGGTTTCATACCCGAGACCCAAAAACAGTGCCATTATCCTGATATTGgtgttaattattaaaattaaaacacatctAACGCAATGATTAGAGAAACACTGCTGTGGTAAAACGTATGATAAAAGCTGATCGCTGTCTACAATCACACTCAATCAAAGCTCTGAGAATTAAACTACTAACAGAGTAACAGATATGATGAGTAACATTTATAAAATGATATGACAGTGTTTTAGCAACACACTTCCATCTCCATCTAAACACAGAatcttttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042045 True 770 lncRNA 0.32 2 7676352 7972344

Neighbor

gene id symbol gene type direction distance location
XLOC_020150 AL929276.1 coding upstream 13756 7655271 ~ 7662596 (+)
XLOC_020149 NA coding upstream 119732 7545824 ~ 7556620 (+)
XLOC_020148 cela1.5 coding upstream 167458 7497319 ~ 7508894 (+)
XLOC_020147 cela1.4 coding upstream 183804 7486867 ~ 7492548 (+)
XLOC_020146 cela1.3 coding upstream 192597 7480465 ~ 7483755 (+)
XLOC_020158 CABZ01034698.1 coding downstream 40188 8012532 ~ 8018914 (+)
XLOC_020159 CABZ01077220.2 coding downstream 293189 8265533 ~ 8265649 (+)
XLOC_020160 CABZ01077220.1 coding downstream 300049 8272393 ~ 8274379 (+)
XLOC_020161 NA coding downstream 325289 8297633 ~ 8314868 (+)
XLOC_020162 CABZ01077217.1 coding downstream 341169 8313513 ~ 8326972 (+)
XLOC_020143 NA non-coding upstream 223932 7452173 ~ 7452420 (+)
XLOC_020141 NA non-coding upstream 608563 7033248 ~ 7067789 (+)
XLOC_020140 NA non-coding upstream 648836 7025462 ~ 7027516 (+)
XLOC_020139 CU929149.1 non-coding upstream 726828 6943403 ~ 6949524 (+)
XLOC_020164 NA non-coding downstream 366861 8339205 ~ 8356509 (+)
XLOC_020166 NA non-coding downstream 403422 8375766 ~ 8495359 (+)
XLOC_020171 NA non-coding downstream 597761 8570105 ~ 8574907 (+)

Expression


Co-expression Network