XLOC_020175 (si:dkey-182g1.2)


Basic Information

Item Value
gene id XLOC_020175
gene name si:dkey-182g1.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8628064 ~ 8634560 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040134
atggttaaagtttttcagctttctttaaaatttcttattttatGCGTGCTTGGAGTCGAGCCCAATTCAGTGAAGACGCTTGAAGTGACAGAAGGCGACCCTGTCTTTCTAGACAGTTGTGTTACCGAAATACAGAAAGATGATAAAGTTGTGTGGAAGTTTGGATCTCGTGTCATCGCCACTATTGCGTCTAACAGTGCATTATTGTATGACACCGATGATGGCATATTCGCAGGCAAACTACAAGTAAATGACAAAACCGGAGATCTCATCATCAGAAATCCCAGACCTAAACACTCGGGGGTTTATGAGGTGAAGATCACCAGTGTCAACAGTGCAATGCCATGCAAGACTTTCAGGGTTGCTGTGCTTGATGCGATGCCTACGGAGGTGTCTGTAAAGGTGGGAGAGCCTGTCATTTTACAGCATAATATTTCTGACGTACACATGTATGATGTAATAGAGTGGATGTTTGAAGATGGCAAGACTGCCATCGCTCGAATCAACAAACAGATCAGTAAAAACCCCTCGTATGATGAAAAGAATGAGAAATTCAAAGGCAGACTGGCGCTGGATCAGACAGGATATCTGACCATCGCAGACTCCAAAACCACAGACTCGGGACTTTATAAACTCGAGGTGATAGGAACCAACTTAAAAGGGAACAGGAACTTTCGTGTTATAGTCAGTGaaccgGGTCTGTCCACAGTTTATATTGTGATCATTTTGGTTGTTATTGTGTTGATCGTGGTGGCGGTGCTCGTTGCGATTAAGTGTCGCATTAATAGAAAGACtgtattataa

Function

symbol description
si:dkey-182g1.2 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-619 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000109368

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040134 True 804 mRNA 0.43 4 8628064 8634560

Neighbor

gene id symbol gene type direction distance location
XLOC_020172 si:ch73-27e22.6 coding upstream 26289 8596974 ~ 8601775 (+)
XLOC_020171 NA coding upstream 53157 8570105 ~ 8574907 (+)
XLOC_020170 zmp:0000000984 coding upstream 74273 8551813 ~ 8553791 (+)
XLOC_020169 si:ch73-27e22.7 coding upstream 84435 8536838 ~ 8543629 (+)
XLOC_020168 CABZ01046407.1 coding upstream 136804 8489400 ~ 8491260 (+)
XLOC_020176 CR450686.2 coding downstream 60536 8695096 ~ 8699930 (+)
XLOC_020177 zmp:0000000652 coding downstream 66678 8701238 ~ 8702901 (+)
XLOC_020178 CR450686.6 coding downstream 94409 8728969 ~ 8733727 (+)
XLOC_020179 si:dkey-182g1.2 coding downstream 118532 8753092 ~ 8770357 (+)
XLOC_020180 si:dkey-182g1.10 coding downstream 137803 8772363 ~ 8809496 (+)
XLOC_020166 NA non-coding upstream 132705 8375766 ~ 8495359 (+)
XLOC_020164 NA non-coding upstream 271555 8339205 ~ 8356509 (+)
XLOC_020161 NA non-coding upstream 313196 8297633 ~ 8314868 (+)
XLOC_020159 CABZ01077220.2 non-coding upstream 362415 8265533 ~ 8265649 (+)
XLOC_020181 NA non-coding downstream 186937 8821497 ~ 8837723 (+)
XLOC_020182 NA non-coding downstream 203865 8838425 ~ 8854534 (+)
XLOC_020183 NA non-coding downstream 251488 8886048 ~ 8894141 (+)
XLOC_020184 NA non-coding downstream 292805 8927365 ~ 8953552 (+)

Expression


Co-expression Network