XLOC_020194


Basic Information

Item Value
gene id XLOC_020194
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 9322757 ~ 9323817 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042062
CTCGGGTCTCCGGGCGGGTACAGCCGCGGTCTCCAGCAGCAGGAGCGCAAACAGCAGCAGCTCGGAGAAGCGTCCGGTTCCCCGCAACATCTCTGCGCCGTCGCCCTTAGGAAAGCCGTGTAAAAGCTGAGCATTTAttcaacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgattatccGGCTGGCCATGGGGATCCTGCCCGGTGCGCGGAGAGAAATGCGGATGAGCACAAACCCAACAGAAACagaaccaca

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042062 True 297 lncRNA 0.58 2 9322757 9323817

Neighbor

gene id symbol gene type direction distance location
XLOC_020193 si:ch211-250k18.7 coding upstream 7633 9286489 ~ 9315124 (+)
XLOC_020192 si:ch211-250k18.6 coding upstream 43425 9262800 ~ 9279332 (+)
XLOC_020191 si:ch211-250k18.5 coding upstream 67469 9239831 ~ 9255288 (+)
XLOC_020190 nlrp15 coding upstream 95875 9110998 ~ 9226882 (+)
XLOC_020188 si:ch211-213a13.2 coding upstream 226509 9060699 ~ 9096248 (+)
XLOC_020195 NA coding downstream 17638 9341455 ~ 9343000 (+)
XLOC_020196 BX927329.2 coding downstream 27555 9351372 ~ 9359403 (+)
XLOC_020197 NA coding downstream 36082 9359899 ~ 9383484 (+)
XLOC_020198 si:ch211-11p18.6 coding downstream 65984 9389801 ~ 9459026 (+)
XLOC_020199 cacna2d2b coding downstream 148997 9472814 ~ 9513061 (+)
XLOC_020189 NA non-coding upstream 256339 9066086 ~ 9066418 (+)
XLOC_020184 NA non-coding upstream 369205 8927365 ~ 8953552 (+)
XLOC_020183 NA non-coding upstream 428616 8886048 ~ 8894141 (+)
XLOC_020182 NA non-coding upstream 468223 8838425 ~ 8854534 (+)
XLOC_020181 NA non-coding upstream 485034 8821497 ~ 8837723 (+)
XLOC_020205 NA non-coding downstream 459137 9782954 ~ 9791367 (+)
XLOC_020211 NA non-coding downstream 562928 9886745 ~ 9904498 (+)

Expression


Co-expression Network