LOC118936923


Basic Information

Item Value
gene id LOC118936923
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 968616 ~ 969528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934572.1
CTTTGTTGAAGTAGTCTAGCAGAGGGCTGAACCAGCGTCAGTTTTTAGATAACGTTTTTTTAAAAGTAGAAAACGGTTGGTTTCTGGAATGAGGAGTCACTAAGCCACACCTACAGCTTCGGgttgttatttttttaatatatttttttttacataggtgACAGATCTGgtacactcactctcacacactgtaCATCTTCAAGTTGCTCTGTCACGTCTTGCCTGGCTGTTGGAAGTTTAGAAGATGGCTGTGAACAAATGTATCAAGTACTTCCTCTTCGTTTTCAACCTGCTGTTCTGGATCAGTGGATGCATCATCCTTGGAGTCTCCATCTACCTCAAAGTGAACCCTGTGTTTGGGGGGTTGTTACCGGGGCTGAACCTGCTGATAGCCGTCGGTACCATCATCACGGTGCTCGGCTTCCTGGGCTGCTTTGGTGCCATCAGGGAAAGCCGCGTCATGCTCATGCTGTTCTTCGTCGGGCtgctcctcatcttcatcctcctgGTGATCGCTGGAATCCTGGGAGCTGTCGGAGTGAATAAGATTGAGGAATGGTTGACGGAGAAGCTGCTACCGCTGAGGAACCAGTCGTCTTTGTTCCAGATGTTCATGCAGAAACTGGAAGAGCAGGCAAAGTGTTGTGGACTGATCCATGGACCTTCAGACTGGGGCTCAACAGTCCCCGCCTCTTGTGACTGCCGTGACACCACTCAGGAGTGCAAACTCGCAGACGGACAACGCAAAGTGTACTTGAGACCTTGTACCAAGTTGGTGATGTCAGTCATCGCGAAGGGTACATTCATCACCCTGGGGATTGCATTTGGCATCGCAGTCTTGATGATCTTTGGAATGGCCTTCGCCATGACCCTGTATTGCCAGATTGGGGAGACGTATGCCACGTTAAGCTAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934572.1 True 913 mRNA 0.49 1 968616 969528

Neighbor

gene id symbol gene type direction distance location
LOC110506977 LOC106595099 coding upstream 60040 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 96102 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 242641 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 246223 714730 ~ 722393 (+)
LOC110512917 csmd3 coding upstream 296422 149182 ~ 672194 (+)
rbms3 rbms3 coding downstream 53933 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 252602 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 339674 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 454788 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 486808 1456336 ~ 1564305 (+)
G104663 NA non-coding upstream 2959 965457 ~ 965657 (+)
G104654 NA non-coding upstream 15449 952907 ~ 953167 (+)
G104647 NA non-coding upstream 24146 944266 ~ 944470 (+)
G104640 NA non-coding upstream 33818 934594 ~ 934798 (+)
G104192 NA non-coding upstream 42253 926037 ~ 926363 (+)
G104674 NA non-coding downstream 9891 979419 ~ 979691 (+)
G104676 NA non-coding downstream 12062 981590 ~ 981815 (+)
G104677 NA non-coding downstream 12398 981926 ~ 982173 (+)
G104681 NA non-coding downstream 16734 986262 ~ 986628 (+)
G104684 NA non-coding downstream 22937 992465 ~ 992671 (+)
G104092 NA other upstream 267345 690046 ~ 701271 (+)
G103851 NA other upstream 787594 174996 ~ 181022 (+)
G104761 NA other downstream 183533 1153061 ~ 1153749 (+)
G105036 NA other downstream 729545 1699073 ~ 1700431 (+)
G105042 NA other downstream 739441 1708969 ~ 1710557 (+)
G106019 NA other downstream 1551188 2520716 ~ 2527972 (+)

Expression


Co-expression Network