XLOC_020797 (si:rp71-36a1.5)


Basic Information

Item Value
gene id XLOC_020797
gene name si:rp71-36a1.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5835693 ~ 5839686 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040995
GTGTGTCTGAGGATGACGCGACGGGAATTTCACTGGCAGAGGGCGATTCAGTCACTCTTCACACTGGTGTTGAAACAAGCCAACAGAACAAAATTAAATGGTATTTTCAGAATATTCTCATAGCTCAAATCATTGTAAATCCCAGTCAGATCTGTACAGATGTTCAGTGTAGTAATGGCACTGAGAGCTTCAGAAACCGACTGAAGCTGGACAatcagactggatctctgaccatcatgaACATCAGAAAAACAGAAGCTGAAGATTACAAACTAAACAtcttcagcagcagcagcagacccCGTCAAAATGTCTTCAAAGTTTCTGTTAATGATGATTCTGCTGCCAAAGTGAAGAGAAAGTTTGTGAAAGGGGGAGAATCTGTCACTTTAGACACTCGTATACAAATTAAAACCACTGATGTGATAAAGTGGCATTTTAATGACCATCTTATTGCTGAAATCAATGAAAATGGAGAGGAGCGTTTCAGAGAGGGATTGATGTTGGACAATcaaactggatctctgaccatcatgaACACCACAGACTCTGGAGATTATTATGTAGAGATCATGATCAGCAGAAGCAACAACTTCAATGTCACCATCTTAAAGAATTTCAGCGTTAATGTCACTG

Function

symbol description
si:rp71-36a1.5 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-091204-428 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000077252

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040995 True 636 mRNA 0.40 2 5835693 5839686

Neighbor

gene id symbol gene type direction distance location
XLOC_020793 NA coding downstream 10494 5723328 ~ 5825199 (-)
XLOC_020796 cers5 coding downstream 13546 5758090 ~ 5822147 (-)
XLOC_020794 bcdin3d coding downstream 83684 5742173 ~ 5752009 (-)
XLOC_020795 BX005329.2 coding downstream 86243 5745303 ~ 5749450 (-)
XLOC_020792 NA coding downstream 111562 5701260 ~ 5724131 (-)
XLOC_020798 NA coding upstream 20454 5860140 ~ 5872272 (-)
XLOC_020799 BX005329.1 coding upstream 31349 5871035 ~ 5894628 (-)
XLOC_020800 si:rp71-36a1.1 coding upstream 68870 5908556 ~ 5919307 (-)
XLOC_020801 si:rp71-36a1.2 coding upstream 83504 5923190 ~ 5933924 (-)
XLOC_020802 si:rp71-36a1.3 coding upstream 100712 5940398 ~ 5958066 (-)
XLOC_020788 NA non-coding downstream 204612 5624373 ~ 5631081 (-)
XLOC_020784 NA non-coding downstream 372578 5453243 ~ 5463115 (-)
XLOC_020803 NA non-coding upstream 137720 5977406 ~ 6009822 (-)
XLOC_020805 CU468041.1 non-coding upstream 204486 6044172 ~ 6046595 (-)
XLOC_020806 NA non-coding upstream 225184 6064870 ~ 6066867 (-)

Expression


Co-expression Network