G111778


Basic Information

Item Value
gene id G111778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9427243 ~ 9427965 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127553
CCCCTATTATATCATTCTTTAcccaaaataaaacaatagagccATTCCTCCCCTATTATATCATTCTttaccaaaataaaacaatagagccATTCCTCCCCTATTATATCATTCTttaccaaaataaaacaatagagccATTCCCCCCCTATTATATCATACTttaccaaaataaaacaatagagccCCCCCCCCTATTATATCATACTttaccaaaataaaacaatagagccATTCCTCCCCTATTATATCATACTttaccaaaataaaacaatagagccATTCCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127553 True 290 lncRNA 0.34 2 9427243 9427965

Neighbor

gene id symbol gene type direction distance location
LOC118944051 LOC106573691 coding upstream 68821 9355022 ~ 9358422 (+)
LOC110520731 LOC106605982 coding upstream 111552 9309984 ~ 9315691 (+)
LOC110535231 LOC106573472 coding upstream 183631 9239896 ~ 9243612 (+)
LOC110535224 aif1 coding upstream 198943 9221418 ~ 9229025 (+)
LOC118937651 LOC106606075 coding upstream 212103 9212074 ~ 9216058 (+)
LOC110519250 mroh1 coding downstream 17225 9445190 ~ 9482500 (+)
LOC110506885 LOC106573706 coding downstream 120737 9548702 ~ 9551644 (+)
LOC110506952 LOC106606100 coding downstream 274025 9701990 ~ 9742723 (+)
LOC110520736 LOC106605972 coding downstream 316901 9744866 ~ 9757901 (+)
LOC110520735 LOC106573422 coding downstream 330363 9758328 ~ 9785173 (+)
G111477 NA non-coding upstream 35074 9391764 ~ 9392169 (+)
G111460 NA non-coding upstream 77211 9349779 ~ 9350032 (+)
G111453 NA non-coding upstream 95627 9330269 ~ 9331616 (+)
G111454 NA non-coding upstream 97142 9329108 ~ 9330101 (+)
G111451 NA non-coding upstream 102904 9322870 ~ 9324339 (+)
G111785 NA non-coding downstream 8635 9436600 ~ 9436829 (+)
G111786 NA non-coding downstream 10672 9438637 ~ 9439444 (+)
G111840 NA non-coding downstream 173794 9601759 ~ 9602403 (+)
G111937 NA non-coding downstream 192147 9620112 ~ 9620393 (+)
LOC110518388 LOC106598833 other upstream 389342 8820359 ~ 9072449 (+)
G110674 NA other upstream 1323323 8073366 ~ 8103920 (+)
G110644 NA other upstream 1492106 7898596 ~ 7935137 (+)
G111788 NA other downstream 12344 9440309 ~ 9444041 (+)
LOC118937659 NA other downstream 346238 9773574 ~ 9776807 (+)
G112697 NA other downstream 1383553 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1812767 11227497 ~ 11243074 (+)

Expression


Co-expression Network