G112409


Basic Information

Item Value
gene id G112409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10023031 ~ 10023585 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128326
AACACTGGGGAGGGCCTCCCTCCTGATGACAGGAAACATTTAAAAAGAAGTCTTTAAAATATTCTCAAATTAAGGTCAGGCAGAAAATACCACCACTTAGGATCTTGTGCGAGATTGTAGTTCCAAAGGAAATAAAACCGATTAGTTCCTGTTTTGCATTGATATCGTTATCACAGCTTGTCAGTCTGTCCTTCTGTGGATTCAGAGTCCAGATCACACCACACCGTCTTTCACATCCAGACCGTCACCTCTGACTCACATACAGCTTCGGTGGTCTCTAAAAACAACACTAATGTCTATTGAGAGAACGTCTGCcagttacatacagtacaaaAACATCTGGAGTGGGTGTTTTTGTTTTCAGGAAACCGGTATGGCCATATATGGAAGTAACGCAAGGCAAAGAACATTTAGTACCAGTCACATCTATTAGCAAAGAGCAGACAGGGGTATTCTCTCAGGATGCTTTTCAACCGGGTAAACAAAGTTGGCTGGCATAACACCACAGCAAGCTGTCAGCATACACCGTCATGGAACATCTTGCATTTGACCACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128326 True 555 lncRNA 0.43 1 10023031 10023585

Neighbor

gene id symbol gene type direction distance location
LOC110493960 LOC106606059 coding downstream 16221 10000730 ~ 10007883 (-)
LOC110507310 LOC106595913 coding downstream 109700 9910470 ~ 9913331 (-)
LOC118937662 NA coding downstream 176174 9846044 ~ 9847233 (-)
LOC110512181 LOC106605978 coding downstream 619538 9392946 ~ 9403493 (-)
LOC110520732 LOC106605979 coding downstream 673726 9330271 ~ 9349305 (-)
trnaa-ugc-2 NA coding upstream 75317 10098902 ~ 10098977 (-)
LOC110507454 LOC106584706 coding upstream 238735 10262320 ~ 10267649 (-)
LOC110507471 LOC106584706 coding upstream 277120 10300705 ~ 10309293 (-)
LOC118944052 NA coding upstream 293193 10316778 ~ 10354245 (-)
LOC110520767 ulk4 coding upstream 378334 10400640 ~ 10611447 (-)
G112408 NA non-coding downstream 347 10022256 ~ 10022684 (-)
G112407 NA non-coding downstream 840 10021593 ~ 10022191 (-)
G112406 NA non-coding downstream 1848 10020869 ~ 10021183 (-)
G112403 NA non-coding downstream 2835 10019950 ~ 10020196 (-)
G112400 NA non-coding downstream 7544 10014875 ~ 10015487 (-)
G112404 NA non-coding upstream 9753 10033338 ~ 10034078 (-)
G112405 NA non-coding upstream 10577 10034162 ~ 10035858 (-)
G112414 pgcp non-coding upstream 14386 10037971 ~ 10038897 (-)
G112429 NA non-coding upstream 34032 10057617 ~ 10057973 (-)
G112415 NA non-coding upstream 38601 10062186 ~ 10062558 (-)
G112076 LOC105018850 other downstream 242576 9779011 ~ 9780455 (-)
G112066 NA other downstream 261366 9761300 ~ 9761665 (-)
G111955 NA other downstream 387901 9634537 ~ 9635130 (-)
G111855 NA other downstream 583093 9439362 ~ 9439938 (-)
G112491 LOC106584755 other upstream 194567 10184147 ~ 10296999 (-)
G112567 NA other upstream 322886 10346471 ~ 10346935 (-)
G112928 NA other upstream 546857 10570442 ~ 10570808 (-)
G112965 NA other upstream 624680 10648265 ~ 10718658 (-)
eif3h LOC100196680 other upstream 713144 10736729 ~ 10808244 (-)

Expression


Co-expression Network