G112404


Basic Information

Item Value
gene id G112404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10033338 ~ 10034078 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128320
GGTACTGTTGGGGACTGGAGTTGGTAAACACTGCTTTATATCAGTAATGTTTTACTAGAAGGGAATGTCCTTTGCTTTGGTGAGATGACACTGGGTAGTTATGGAATCCTGTAATTCATTTCACACAATGACAAGAAAAataccataataacaaagcaaaacaaaATGTTTTCATCCAAGTTAAATTGGAGACCAGATTGCTTTGAGACTAGAAACATTACATCACCTCGACATGAAAAACATAAGTTAATGAAAAACAGCTTTGGACATGCTATGAAAAAAATCAAAAATAGAATAGCTATAGGACAATTATATTCTGTCATTTTTATTTCAGTgacctttttaaaaaaaagttgtttttCCTTCCTTACAAATATGTACCTCTACAGTTAGAAAGTAGTCCATGACCATCTATGAATATGTTTCACGTTCTCACATGACAAGGAAATTCTCCAACCGTTCTAATGATCCACAATATGAAACATTTACAATAGCCCTGTTTGGCCTCATTAAGGAAAAGTATATATTTGCTATATGAAAAAGCTCCTTGAAACACTTCCTCATTCAATACCATTTCAACCAACAGCATGCGAGGAGGACCCTGCTGTATGAGATGTtttgtatgcatcccaaatgacaccctatatgGTGCACAGATACTGGTTAAAAGTAGTAAGTACACTATagagggcatagggtgccatttgggacacagccttcgTCTTTATGTTGCTCCAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128320 True 741 lncRNA 0.36 1 10033338 10034078

Neighbor

gene id symbol gene type direction distance location
LOC110493960 LOC106606059 coding downstream 26528 10000730 ~ 10007883 (-)
LOC110507310 LOC106595913 coding downstream 120007 9910470 ~ 9913331 (-)
LOC118937662 NA coding downstream 186481 9846044 ~ 9847233 (-)
LOC110512181 LOC106605978 coding downstream 629845 9392946 ~ 9403493 (-)
LOC110520732 LOC106605979 coding downstream 684033 9330271 ~ 9349305 (-)
trnaa-ugc-2 NA coding upstream 64824 10098902 ~ 10098977 (-)
LOC110507454 LOC106584706 coding upstream 228242 10262320 ~ 10267649 (-)
LOC110507471 LOC106584706 coding upstream 266627 10300705 ~ 10309293 (-)
LOC118944052 NA coding upstream 282700 10316778 ~ 10354245 (-)
LOC110520767 ulk4 coding upstream 367841 10400640 ~ 10611447 (-)
G112409 NA non-coding downstream 9753 10023031 ~ 10023585 (-)
G112408 NA non-coding downstream 10654 10022256 ~ 10022684 (-)
G112407 NA non-coding downstream 11147 10021593 ~ 10022191 (-)
G112406 NA non-coding downstream 12155 10020869 ~ 10021183 (-)
G112403 NA non-coding downstream 13142 10019950 ~ 10020196 (-)
G112405 NA non-coding upstream 84 10034162 ~ 10035858 (-)
G112414 pgcp non-coding upstream 3893 10037971 ~ 10038897 (-)
G112429 NA non-coding upstream 23539 10057617 ~ 10057973 (-)
G112415 NA non-coding upstream 28108 10062186 ~ 10062558 (-)
G112413 LOC106606032 non-coding upstream 35071 10069149 ~ 10074892 (-)
G112076 LOC105018850 other downstream 252883 9779011 ~ 9780455 (-)
G112066 NA other downstream 271673 9761300 ~ 9761665 (-)
G111955 NA other downstream 398208 9634537 ~ 9635130 (-)
G111855 NA other downstream 593400 9439362 ~ 9439938 (-)
G112491 LOC106584755 other upstream 184074 10184147 ~ 10296999 (-)
G112567 NA other upstream 312393 10346471 ~ 10346935 (-)
G112928 NA other upstream 536364 10570442 ~ 10570808 (-)
G112965 NA other upstream 614187 10648265 ~ 10718658 (-)
eif3h LOC100196680 other upstream 702651 10736729 ~ 10808244 (-)

Expression


Co-expression Network