Gene
RNA
| Item | Value |
|---|---|
| gene id | G114433 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12718299 ~ 12718760 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: glycine-rich cell wall structural protein 1.8-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU131309 | True | 462 | lncRNA | 0.40 | 1 | 12718299 | 12718760 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937723 | LOC106561136 | coding | downstream | 2689 | 12683093 ~ 12715610 (-) |
| LOC118937724 | NA | coding | downstream | 34524 | 12683058 ~ 12683775 (-) |
| pop1 | LOC106561139 | coding | downstream | 44425 | 12639702 ~ 12673874 (-) |
| LOC118944197 | NA | coding | downstream | 100605 | 12617506 ~ 12617694 (-) |
| LOC118937718 | LOC106590816 | coding | downstream | 164780 | 12549299 ~ 12553519 (-) |
| LOC110525147 | LOC106570794 | coding | upstream | 94890 | 12813650 ~ 12890396 (-) |
| pabpc1a | LOC106593394 | coding | upstream | 205712 | 12924472 ~ 12934534 (-) |
| LOC118944179 | NA | coding | upstream | 206597 | 12925357 ~ 12925439 (-) |
| LOC110507522 | LOC106606066 | coding | upstream | 344330 | 13063090 ~ 13083743 (-) |
| LOC110507534 | LOC106606051 | coding | upstream | 367409 | 13086169 ~ 13094428 (-) |
| G114409 | NA | non-coding | downstream | 34388 | 12682779 ~ 12683911 (-) |
| G114410 | NA | non-coding | downstream | 38154 | 12674092 ~ 12680145 (-) |
| G114414 | NA | non-coding | downstream | 47796 | 12669799 ~ 12670503 (-) |
| G114413 | NA | non-coding | downstream | 66328 | 12650448 ~ 12651971 (-) |
| G114435 | NA | non-coding | upstream | 4702 | 12723462 ~ 12724722 (-) |
| G114436 | NA | non-coding | upstream | 5072 | 12723832 ~ 12725375 (-) |
| G114443 | NA | non-coding | upstream | 20482 | 12739242 ~ 12739759 (-) |
| G114450 | NA | non-coding | upstream | 29069 | 12747829 ~ 12749050 (-) |
| G114454 | NA | non-coding | upstream | 33987 | 12752747 ~ 12753840 (-) |
| G114424 | NA | other | downstream | 8984 | 12707827 ~ 12709315 (-) |
| G114402 | NA | other | downstream | 104619 | 12610669 ~ 12613680 (-) |
| G114390 | NA | other | downstream | 133159 | 12584027 ~ 12585140 (-) |
| LOC110513475 | LOC106592216 | other | downstream | 1059631 | 11471939 ~ 12290710 (-) |
| G113733 | LOC106606124 | other | downstream | 1365558 | 11349342 ~ 11352741 (-) |
| G114442 | NA | other | upstream | 16554 | 12735314 ~ 12739157 (-) |
| LOC110513400 | snrk | other | upstream | 577073 | 13250306 ~ 13324680 (-) |
| G114812 | NA | other | upstream | 611988 | 13330748 ~ 13332506 (-) |
| LOC110534058 | LOC106593045 | other | upstream | 775688 | 13494448 ~ 13500298 (-) |
