G115701



Basic Information


Item Value
gene id G115701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14639305 ~ 14639664 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU132931
GCAAATTTGTTTAGGTTCAACATAATATTCCATTGATGTTCACACAATATACATTTGACCTTGTCTTGGAAGTCCTCAGACGACTTCTAGAACATTTCGATTTAAGTTTGACCTAATATTACCACAACAGTCTCAGCATGAACATTCGTAGCTCCTTAATTACctcagtgggctaaatcagggtcacagagtgattcttgttagtcttaaacaaatatgctttgaaacaaaagtatacacctcacacacatggttatgggcttcaaaaaaagaagacacctgtaccatgtcagatatagagttgaaatgtattacattttgagtttgcatcccaatattacactttatatacatcacaga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU132931 True 360 lncRNA 0.35 1 14639305 14639664

Neighbor


gene id symbol gene type direction distance location
alg2 alg2 coding downstream 83098 14550685 ~ 14556207 (-)
LOC110508190 LOC106606061 coding downstream 106065 14528061 ~ 14533240 (-)
tmem245 LOC106595499 coding downstream 112747 14508116 ~ 14526558 (-)
LOC110535605 LOC106574865 coding downstream 221141 14408991 ~ 14418164 (-)
LOC110516895 LOC106574265 coding downstream 232495 14404395 ~ 14406810 (-)
LOC110535698 LOC106593159 coding upstream 134649 14774313 ~ 14795026 (-)
trnat-cgu NA coding upstream 194735 14834399 ~ 14834471 (-)
tex10 tex10 coding upstream 197925 14837589 ~ 14860473 (-)
rbm12ba LOC106605943 coding upstream 228166 14867830 ~ 14870776 (-)
LOC110534175 cdh17 coding upstream 262724 14902388 ~ 14923867 (-)
G115698 NA non-coding downstream 3730 14635315 ~ 14635575 (-)
G115695 NA non-coding downstream 9407 14629694 ~ 14629898 (-)
G115601 sc61b non-coding downstream 73906 14556423 ~ 14565399 (-)
G115659 NA non-coding downstream 132743 14505905 ~ 14506562 (-)
G115656 NA non-coding downstream 135774 14503331 ~ 14503531 (-)
G115712 NA non-coding upstream 17816 14657480 ~ 14657803 (-)
G115713 NA non-coding upstream 18202 14657866 ~ 14658184 (-)
G115714 NA non-coding upstream 18570 14658234 ~ 14658523 (-)
G115958 NA non-coding upstream 56359 14696023 ~ 14696532 (-)
G115981 NA non-coding upstream 109109 14748773 ~ 14749158 (-)
G115492 NA other downstream 414386 14126196 ~ 14224919 (-)
G116014 NA other upstream 175615 14815279 ~ 14816661 (-)
G116023 NA other upstream 245475 14885139 ~ 14886488 (-)
LOC110507888 LOC106570745 other upstream 361029 14981044 ~ 15004730 (-)
G116125 NA other upstream 444963 15084627 ~ 15084939 (-)

Expression



Co-expression Network