alg2 (alg2)


Basic Information

Item Value
gene id alg2
gene name alg2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14550685 ~ 14556207 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588600.2
TGACGTGTCTCATAGGAAGCGACGTGCTCCAGAGGGTGGCATCTGACGCTATTTTGGTTCAACACAGGGGGATTTTGCCGTTGTAAATTAATTGAACATTTGAGCCATCATGTCGATTAGTAGGCTCAGTGGCATGTTAGTGTTCGTAAGTTGACCACTGTTTCCTGGACACAAGTTGGACAGACTGCATTATCAAGGAGTGAAAGGATGGTGCGGGTGGTGTTTCTCCACCCAGACCTGGGTATAGGTGGTGCAGAGAGGCTGGTGGTGGATGCAGCTGTAGCTCTACGCTCTCGCGGCTGCAGTGTTCAGATCTGGACGGCCCACCATGATCCCACACACTGCTTCTCAGAGACACTGGACCCAGACCTGAACGTGgtgtgtgtgggtgactgGTTGCCCACCAGTGTGTTTGGGTACCTGCATGCCCTGTGTGCCTACCTCAGGATGATCTACGTAGCTCTCTACGTGGTCTTCCTCAGTGGAGTAGAGTATGACGTGGTCTTCTGTGATCAGGTGTCGGTGTGTATCCCAGTCCTGAGGTTGTCTCGTCAGAGGAAAAAGGTTCTGTTCTACTGTCATTTCCCAGACCAGCTCCTGACCCAGAGAGGCTCAGCTCTGAAAAAGCTCTACCGCGCCCCCATAGACAGACTGGAGGAACTCACCACTGGCATGGCTGATATGGTGCTGGTGAACAGTTGTTTCACCGCAGTGGTCTTTAGGGAGACCTTCCGTTCCCTGGATGGGGTCCAGACTGacgtcctctatccctccctcaacacacacagctttgacAGCCCCCCTGAGGAGCAGCTAGAGCAGGGTCTGGGGGGCTTGATCCCTGAAGGTGTGtcctgcctcttcctgtctctgaacCGCTATGAGAGGAAGAAGAGCCTGGGTCTGGCCCTGGAGGGCCTCTCTTCCCTGAAGACCCGCCTCGCCACAGGGGACCAGGCAGGAATCCACCTGGTGGTGGCAGGGGGGTACGACGGCCGTGTTGCGGAGAATGTCCAGCACTACGCTGAGCTGAAGGAGCTAGCAGCACGGCTGGGATTGGAGGACTCTGTCACCTTCCTGCGCTCTCCCTCAGACAGCCAGAAGGTGGCGCTGTTGCGGGGCAGTGCATGCGTTCTCTACACGCCCAGCAGAGAGCACTTTGGGATAGTGCCAGTGGAGGCCATGTACTGCTGCTGTCCCGTCATTGCTGTGAGGTCTGGAGGGCCTCTGGAGAGTGTAGGTGACGGGGAGACGGGCTTCCTGTGTGAGCCCACGGCCGAGGCCTTCTCCCTGGCCATGGAGAAGCTGTTCAGAGACCCCCAGCTCCGCAGGGACATGGGCCAGGCCGGCAGGAGGCGGGTTCAGGAGAAGTTCTCCCTGGAGGCCTTCTCAAACCAGCTGCACGGGTACATCCTCAGACTGACCCAGTGACACCTCTGCTGGAGCAGTAACTGGGCTGGGGTGCGTTAGCGGAGCAGCTTTCGGTAGAAGTCGCCCTTAGACACATCTAGATCATCTTACCTTCTCTCAATCCCTGCCTAAATCCTAACTAAAGAATGGAGAACTGACCTGAGATCATTTTCATCCTACTGCAACTATAGCCAGGTAGAGGTGGATGGGCTAGATGTGTAGGGATAAAATACGGTTACTGAGGACTGGAGGACAGACTGGGGAGGGGGTAATGTAGAGGTACGCTGACTGAGGAGGACTCTAGACAATTAGTCATTGCTCCTCCAGGAGGGGTTGCTgagggaatggagggatggaatcTCAGCTCCAATTAACAAAAGAGTAAGGACTTTACCCATACTGCCCCGGGGCCTCTCGTAACAATACCAGCACCGGCCCTTGGttccagaagtgtgtgtgtgagggggtgaCCAAGGGCTTAATGAACAAGAGCTACAAAACCACTCTGATGGATCTGTAGTGTGATAGACGTGCTGCTGTGTGTTTGCGCATGCCACCGAGCGCCATTAGCCAGTTGGCAGCCACAGATCGATAAGCAGGATGTTTGCCACTTCCTCTGCCCTTTCAGACCTTGGTTACTTTTCACAATGAGGGAATGTTTGGCCTGTACATTGCTGTTGCTGTCGGTCTCTGGGTTATTAGGAGATGATGCTGTGTGTTggtcattatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagcatagAAGGTCATGTTGTCTgctggtcagtctgtgttactAACCTCTAGAAGAGCTCTTATTGACATGCCTCAAGTCTTAATAAAACAGTCAGAGGACACATATCTGGTTTACCAAC
>TU132893
CATCTGACGCTATTTTGGTTCAACACAGGGGGATTTTGCCGTTGTAAATTAATTGAACATTTGAGCCATCATGTCGATTAGTAGGCTCAGTGGCATGTTAGTGTTCGTAAGTTGACCACTGTTTCCTGGACACAAGTTGGACAGACTGCATTATCAAGGAGTGAAAGGATGGTGCGGGTGGTGTTTCTCCACCCAGACCTGGGTATAGGTGGTGCAGAGAGGCTGGTGGTGGATGCAGCTGTAGCTCTACGCTCTCGCGGCTGCAGTGTTCAGATCTGGACGGCCCACCATGATCCCACACACTGCTTCTCAGAGACACTGGACCCAGACCTGAACGTGgtgtgtgtgggtgactgGTTGCCCACCAGTGTGTTTGGGTACCTGCATGCCCTGTGTGCCTACCTCAGGATGATCTACG

Function

symbol description
alg2 Predicted to enable alpha-1,3-mannosyltransferase activity and glycolipid mannosyltransferase activity. Predicted to be involved in oligosaccharide-lipid intermediate biosynthetic process and protein glycosylation in endoplasmic reticulum. Predicted to act upstream of or within protein glycosylation. Located in nucleus. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ii and congenital myasthenic syndrome 14. Orthologous to human ALG2 (ALG2 alpha-1,3/1,6-mannosyltransferase).

NR:

description
alpha-1,3/1,6-mannosyltransferase ALG2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588600.2 False 2288 mRNA 0.54 5 14550685 14556207
TU132893 True 418 TUCP 0.40 3 14555259 14556168

Neighbor

gene id symbol gene type direction distance location
LOC110508190 LOC106606061 coding downstream 17445 14528061 ~ 14533240 (-)
tmem245 LOC106595499 coding downstream 24127 14508116 ~ 14526558 (-)
LOC110535605 LOC106574865 coding downstream 132521 14408991 ~ 14418164 (-)
LOC110516895 LOC106574265 coding downstream 143875 14404395 ~ 14406810 (-)
LOC110490504 LOC106574261 coding downstream 145641 14398357 ~ 14405044 (-)
LOC110535698 LOC106593159 coding upstream 218106 14774313 ~ 14795026 (-)
trnat-cgu NA coding upstream 278192 14834399 ~ 14834471 (-)
tex10 tex10 coding upstream 281382 14837589 ~ 14860473 (-)
rbm12ba LOC106605943 coding upstream 311623 14867830 ~ 14870776 (-)
LOC110534175 cdh17 coding upstream 346181 14902388 ~ 14923867 (-)
G115659 NA non-coding downstream 44123 14505905 ~ 14506562 (-)
G115656 NA non-coding downstream 47154 14503331 ~ 14503531 (-)
G115655 NA non-coding downstream 48115 14502369 ~ 14502570 (-)
G115610 NA non-coding downstream 48548 14501833 ~ 14502137 (-)
G115645 LOC107593713 non-coding downstream 65455 14484259 ~ 14485230 (-)
G115601 sc61b non-coding upstream 216 14556423 ~ 14565399 (-)
G115695 NA non-coding upstream 73487 14629694 ~ 14629898 (-)
G115698 NA non-coding upstream 79108 14635315 ~ 14635575 (-)
G115701 NA non-coding upstream 83098 14639305 ~ 14639664 (-)
G115712 NA non-coding upstream 101273 14657480 ~ 14657803 (-)
G115492 NA other downstream 325766 14126196 ~ 14224919 (-)
LOC110535427 LOC106585544 other downstream 489727 14046340 ~ 14080800 (-)
G115431 LOC106574784 other downstream 574124 13962185 ~ 13976561 (-)
G116014 NA other upstream 259072 14815279 ~ 14816661 (-)
G116023 NA other upstream 328932 14885139 ~ 14886488 (-)
LOC110507888 LOC106570745 other upstream 444486 14981044 ~ 15004730 (-)

Expression


Co-expression Network