G115431 (LOC106574784)


Basic Information

Item Value
gene id G115431
gene name LOC106574784
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13962185 ~ 13976561 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132581
GAATAAGAATTTAATTTAAAATATACTGTCAAAGCAGAGATATACTTTAGTGTGTATAGCCAATCATTCTCAAGAATAGCTggtttaaatgttatttttcatTTTGATGATAAAATAtttcaagagcagcagtaataTAATCGTAACAATAAATGGGATTTATAGAGCTATTTTCAAAGACCAAAATAAGTTTTTACAGTAGAGAGCaaagaaataaaaacatattAAATAAAGTCAAACTTATCATAACTTCTATTATAGTTCATGctaataaaatgtaaattaaGTCATAATAGGTACACACAAGAACAATAAAAACATTGAAGAGTTGAGCAGAACGTCTATATATCTAAACCGTTATATAATGGTCCCTCCCTATTCCCAGCCGATCCGCCCCTGCTTCCGGGAGAATTCTGGATTCCTAGCTCGGTTGAATCTGTCCTTGCTCTTGTGCCGGGTCCGCACTGAGACCAAAGTCCAACCCAGATCGTCCTCTGACTTGGCCTTGCTCCCACCTCcagcaccatcatcatcatcatattccAGAGCCAGAATGTGTAGATGGGCCGTCAGATCGTCCAGTGGCTGTGTCAAGGATGGAGGTGTGGCCCTCTGCGGCCCAGACACCAAGGGGATGACAGCAACACTGGTCTAGAGGTTATGGTTGATTTAGGAAGGGACACCTTACCAGGCACACTGAGGCTCAGGAGGCACAGCAGTTGGTTCAGGTCAAGGCATTCTTTCAGGTAGCACTGCCACTGGCTGTAGGCGTGGGCCACACACAGGTTGAGACTCCTTGTCCCTctcttgtccctctccctctccaacacTGGTCCCTCCATGAAC

Function

NR:

description
protein asteroid homolog 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132581 True 846 TUCP 0.43 2 13962185 13976561

Neighbor

gene id symbol gene type direction distance location
LOC110535305 LOC106574784 coding downstream 1931 13957030 ~ 13960254 (-)
LOC110535382 ci023 coding downstream 24646 13935838 ~ 13937539 (-)
LOC110534076 LOC106605869 coding downstream 26909 13926181 ~ 13935276 (-)
LOC110535394 LOC106574842 coding downstream 47809 13828279 ~ 13914376 (-)
LOC118937748 LOC106574107 coding downstream 300554 13650726 ~ 13661631 (-)
LOC110534084 LOC106574737 coding upstream 4725 13981286 ~ 14027878 (-)
LOC110535427 LOC106585544 coding upstream 69779 14046340 ~ 14080800 (-)
LOC110535417 LOC106585541 coding upstream 179105 14155666 ~ 14187261 (-)
LOC110513641 NA coding upstream 313655 14290216 ~ 14291275 (-)
LOC110533643 LOC106605966 coding upstream 356190 14332751 ~ 14335014 (-)
G115414 NA non-coding downstream 42460 13919119 ~ 13919725 (-)
G115041 NA non-coding downstream 156307 13805665 ~ 13805878 (-)
G115031 NA non-coding downstream 165664 13796216 ~ 13796521 (-)
G115030 NA non-coding downstream 166126 13795775 ~ 13796059 (-)
G115021 NA non-coding downstream 176606 13785353 ~ 13785579 (-)
G115443 NA non-coding upstream 40273 14016834 ~ 14017064 (-)
G115450 NA non-coding upstream 55405 14031966 ~ 14033473 (-)
G115460 NA non-coding upstream 60800 14037361 ~ 14119171 (-)
G115484 NA non-coding upstream 132946 14109507 ~ 14144417 (-)
G114928 LOC106574568 other downstream 379579 13574535 ~ 13582606 (-)
LOC110534058 LOC106593045 other downstream 461902 13494448 ~ 13500298 (-)
G114812 NA other downstream 629679 13330748 ~ 13332506 (-)
LOC110513400 snrk other downstream 638862 13250306 ~ 13324680 (-)
G115492 NA other upstream 247298 14126196 ~ 14224919 (-)
LOC110535605 LOC106574865 other upstream 433205 14408991 ~ 14418164 (-)
tmem245 LOC106595499 other upstream 549507 14508116 ~ 14526558 (-)
alg2 alg2 other upstream 578698 14550685 ~ 14556207 (-)

Expression


Co-expression Network