G115460


Basic Information

Item Value
gene id G115460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14037361 ~ 14119171 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132624
taaagaagctctgtttaagttagttcgcttttgggtcctcattcactcgcCGTAACAAAATCTTCctacccactagaattgtgatacagtgaattttaagtgaaataatctgactgtaaacaattgtttgaaaaatgacttgcgtcatgcacaaagtagatgtcctaaaccactttgcaaaactatagtttggtttcagtgtagcctagtgttttgagcgttggactagtaaccgaaaggttgcaagatcaaatccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccgtcattgaaaataagaatttgctcttaactgacttgcctggtaaaatcaaaaaataaataaacacacacatacacaaaccaaTCTGGACctaccatctacacacacaccaatctGGACCTACCATCTACACACAAACCAATCTGGACctaccatctacacacacaccaatctGGACCTACTATCT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132624 True 510 lncRNA 0.40 2 14037361 14119171

Neighbor

gene id symbol gene type direction distance location
LOC110534084 LOC106574737 coding downstream 9483 13981286 ~ 14027878 (-)
LOC110535305 LOC106574784 coding downstream 77107 13957030 ~ 13960254 (-)
LOC110535382 ci023 coding downstream 99822 13935838 ~ 13937539 (-)
LOC110534076 LOC106605869 coding downstream 102085 13926181 ~ 13935276 (-)
LOC110535394 LOC106574842 coding downstream 122985 13828279 ~ 13914376 (-)
LOC110535417 LOC106585541 coding upstream 36495 14155666 ~ 14187261 (-)
LOC110513641 NA coding upstream 171045 14290216 ~ 14291275 (-)
LOC110533643 LOC106605966 coding upstream 213580 14332751 ~ 14335014 (-)
LOC110490474 LOC106606103 coding upstream 246558 14365729 ~ 14374923 (-)
LOC110490494 LOC106586326 coding upstream 267562 14386733 ~ 14398249 (-)
G115450 NA non-coding downstream 3888 14031966 ~ 14033473 (-)
G115443 NA non-coding downstream 20297 14016834 ~ 14017064 (-)
G115414 NA non-coding downstream 117636 13919119 ~ 13919725 (-)
G115041 NA non-coding downstream 231483 13805665 ~ 13805878 (-)
G115031 NA non-coding downstream 240840 13796216 ~ 13796521 (-)
G115490 NA non-coding upstream 6231 14125402 ~ 14223694 (-)
G115491 NA non-coding upstream 6446 14125617 ~ 14126839 (-)
G115492 NA non-coding upstream 7025 14126196 ~ 14224919 (-)
G115557 LOC106585523 non-coding upstream 181000 14300171 ~ 14307142 (-)
G115561 NA non-coding upstream 204909 14324080 ~ 14324335 (-)
G115431 LOC106574784 other downstream 60800 13962185 ~ 13976561 (-)
LOC118937748 LOC106574107 other downstream 375770 13650726 ~ 13661631 (-)
G114928 LOC106574568 other downstream 454755 13574535 ~ 13582606 (-)
LOC110534058 LOC106593045 other downstream 537078 13494448 ~ 13500298 (-)
G114812 NA other downstream 704855 13330748 ~ 13332506 (-)
LOC110535605 LOC106574865 other upstream 290595 14408991 ~ 14418164 (-)
tmem245 LOC106595499 other upstream 406897 14508116 ~ 14526558 (-)
alg2 alg2 other upstream 436088 14550685 ~ 14556207 (-)
G115601 sc61b other upstream 444632 14556423 ~ 14565399 (-)

Expression


Co-expression Network