LOC110490474 (LOC106606103)


Basic Information

Item Value
gene id LOC110490474
gene name LOC106606103
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14365729 ~ 14374923 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036962190.1
TAGGCAACAGCCACACGGTGGTACAGTTGCCTAAGCTTAATTCTGGCACTTGTAACCCCCCATACTCTTCTGTTAACGACAGGGGTGTAGACAAGCCGTTCATTTGCGGAAGTGTGGATCTAGGTTTTAAACAAGAACGCAACAACAAAGGGCATTGCTTTGGAAAGTCGTGGAAATACGATATCTATCGCCAAGGCATACCTATTCAGTTGGTTGTTCCAAATTTGACACTCACACCATGGCTGCCGCGGAACCAGTCTACAGTCCAACAACAGTTTCAGAGACCAAATCCAAAAAGTGGTTAATTGTACCAACAGATAATTTGGATAAAGTCAGATGTTTGATAAAGGTGGTGGAAGTGCTCCTGTCGTTTGTGGCCTTCATTCTTGAAGAGGTAGTGACGAACTGTATGAGCTGCTCTCCGCTGTACTTCTTTGAGTTTGTCAGCTGCACAGCCTTCCTCTTCACagctctcctcctcatcctcctcgctACCACCCTGCACAAGAGAGTGGGCATCAGTTGCTGGCCCTCCctgGACTTTGTGTACACAGCTTTGATGGCTGCATTCTTCCTCATCGCCTCCATTGTGTTTGCCTCAGATAATGGTGGAACTGACCTGGAGAATGCTGCTGTGGCATTTGGCTTCCTGGCCACTGTGGCATTCCTGGTGGATGCTGGCTGGTTTGTGAAGACCAGGGGTTTTCCTTTTAAAAAGACCAACCAGCAAGCCGCAAGCAACGGTGGGGCCCCTGTGGCAGAGGCCGAGAAACTCAACAGGGAACAGAACGAAGCAGACTAGGCCCAGGGATACCTAACGAGTGTAACACTGGTGTCTCTTTCTCCCACATTTACACACGCAAACAGGCAACACACTAAGACTATCAGAGGGCCACCTTATATCTGCTTAAAGGAAGGAAAGGAATCTCCAGTAGTTTTAACAGCTTATTCAGAGCTTTTATTCTTAGCAGTGGGACCATTTTTGTAGGAGACATGGTCTGTGTTGTATACATTCTGTTTCCTTGGACCATGGAGCTGCTTGGAATGGGACCACTCATTGATAGAAATGGACcaaggctctccaaccctgttcctggagatctatccTCCTGTAgcttttcactccaaccctgttcctggagatctatccTCCTGTAGCTttttac

Function

NR:

description
CKLF-like MARVEL transmembrane domain-containing protein 6

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036962190.1 True 1166 mRNA 0.48 5 14365729 14374923

Neighbor

gene id symbol gene type direction distance location
LOC110533643 LOC106605966 coding downstream 30715 14332751 ~ 14335014 (-)
LOC110513641 NA coding downstream 74454 14290216 ~ 14291275 (-)
LOC110535417 LOC106585541 coding downstream 178468 14155666 ~ 14187261 (-)
LOC110535427 LOC106585544 coding downstream 284929 14046340 ~ 14080800 (-)
LOC110534084 LOC106574737 coding downstream 337851 13981286 ~ 14027878 (-)
LOC110490494 LOC106586326 coding upstream 11810 14386733 ~ 14398249 (-)
LOC110490504 LOC106574261 coding upstream 23434 14398357 ~ 14405044 (-)
LOC110516895 LOC106574265 coding upstream 29472 14404395 ~ 14406810 (-)
LOC110535605 LOC106574865 coding upstream 34068 14408991 ~ 14418164 (-)
tmem245 LOC106595499 coding upstream 133193 14508116 ~ 14526558 (-)
G115568 NA non-coding downstream 1422 14363177 ~ 14364307 (-)
G115575 NA non-coding downstream 20437 14340647 ~ 14345292 (-)
G115567 LOC106605965 non-coding downstream 25187 14340148 ~ 14340542 (-)
G115564 NA non-coding downstream 28441 14336994 ~ 14337288 (-)
G115561 NA non-coding downstream 41394 14324080 ~ 14324335 (-)
G115586 NA non-coding upstream 170 14375093 ~ 14375324 (-)
G115590 NA non-coding upstream 5366 14380289 ~ 14380500 (-)
G115612 NA non-coding upstream 45861 14420784 ~ 14421033 (-)
G115492 NA other downstream 140810 14126196 ~ 14224919 (-)
G115431 LOC106574784 other downstream 389168 13962185 ~ 13976561 (-)
LOC118937748 LOC106574107 other downstream 704138 13650726 ~ 13661631 (-)
G114928 LOC106574568 other downstream 783123 13574535 ~ 13582606 (-)
alg2 alg2 other upstream 180336 14550685 ~ 14556207 (-)
G115601 sc61b other upstream 188880 14556423 ~ 14565399 (-)
G116014 NA other upstream 440356 14815279 ~ 14816661 (-)

Expression


Co-expression Network