G115557 (LOC106585523)


Basic Information

Item Value
gene id G115557
gene name LOC106585523
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14300171 ~ 14307142 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132747
CTTGAGTTTGTGCTCCTTCCTGTTGATGATGACGGCGGTGATCTGCTGGTCCATGAAGATGAGGATGGTGCAGAGCAGGGCAGGGATGGCTGCAGCCAGCATGGTCCACCAGGGGTTGGTCCCCAGCGGGGAGATCACCCAGCCACGGTTCTCAGACGTGGGCTGAAAGCGGTCAGGCACATTCAGTTTGGGGGAGGGAATGCCCACCAGGTAGTCCACCAGGACCATGATCATGATGGTCAGGAAGACCGCAAAGTCACTGATGGTCGACCGTACCTTGGTGGGAAAGTAGAGCTTGGTCTTGAACTGcttgaggaaggaggagaggaagaaggtaGTGAAGAAGAGGATGACGGACCAGAAGAGGACGTCAGGGATGTAGGGACCATGGTGGCCGCAAGCTGGCCCAACAAACTCCCCACGCAGCCTAGAACACTCCTACAACACAGACCGGGGGAAGGACAGTTGAGGGTTGTCAAAATCAACTATGTCCATGCATGAAATCAATGTCATTTTACTATTGAAATGGAAAACCAG

Function

NR:

description
PREDICTED: sodium bicarbonate cotransporter 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132747 True 537 lncRNA 0.54 3 14300171 14307142

Neighbor

gene id symbol gene type direction distance location
LOC110513641 NA coding downstream 8896 14290216 ~ 14291275 (-)
LOC110535417 LOC106585541 coding downstream 112910 14155666 ~ 14187261 (-)
LOC110535427 LOC106585544 coding downstream 219371 14046340 ~ 14080800 (-)
LOC110534084 LOC106574737 coding downstream 272293 13981286 ~ 14027878 (-)
LOC110535305 LOC106574784 coding downstream 339917 13957030 ~ 13960254 (-)
LOC110533643 LOC106605966 coding upstream 25609 14332751 ~ 14335014 (-)
LOC110490474 LOC106606103 coding upstream 58587 14365729 ~ 14374923 (-)
LOC110490494 LOC106586326 coding upstream 79591 14386733 ~ 14398249 (-)
LOC110490504 LOC106574261 coding upstream 91215 14398357 ~ 14405044 (-)
LOC110516895 LOC106574265 coding upstream 97253 14404395 ~ 14406810 (-)
G115490 NA non-coding downstream 76477 14125402 ~ 14223694 (-)
G115484 NA non-coding downstream 155754 14109507 ~ 14144417 (-)
G115492 NA non-coding downstream 172987 14126196 ~ 14224919 (-)
G115491 NA non-coding downstream 173332 14125617 ~ 14126839 (-)
G115460 NA non-coding downstream 181000 14037361 ~ 14119171 (-)
G115561 NA non-coding upstream 16938 14324080 ~ 14324335 (-)
G115564 NA non-coding upstream 29852 14336994 ~ 14337288 (-)
G115567 LOC106605965 non-coding upstream 33006 14340148 ~ 14340542 (-)
G115575 NA non-coding upstream 33505 14340647 ~ 14345292 (-)
G115568 NA non-coding upstream 56035 14363177 ~ 14364307 (-)
G115431 LOC106574784 other downstream 323610 13962185 ~ 13976561 (-)
LOC118937748 LOC106574107 other downstream 638580 13650726 ~ 13661631 (-)
G114928 LOC106574568 other downstream 717565 13574535 ~ 13582606 (-)
LOC110535605 LOC106574865 other upstream 102624 14408991 ~ 14418164 (-)
tmem245 LOC106595499 other upstream 218926 14508116 ~ 14526558 (-)
alg2 alg2 other upstream 248117 14550685 ~ 14556207 (-)
G115601 sc61b other upstream 256661 14556423 ~ 14565399 (-)
G116014 NA other upstream 508137 14815279 ~ 14816661 (-)

Expression


Co-expression Network