Gene
RNA
| Item | Value |
|---|---|
| gene id | G123150 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22612026 ~ 22616872 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142265 | True | 271 | lncRNA | 0.60 | 2 | 22612026 | 22616872 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rps19 | LOC100689943 | coding | downstream | 80970 | 22525184 ~ 22531056 (-) |
| bcam | LOC106577531 | coding | downstream | 112880 | 22399657 ~ 22499146 (-) |
| LOC110537898 | LOC106605692 | coding | downstream | 295958 | 22314451 ~ 22316068 (-) |
| LOC110537882 | LOC106577487 | coding | downstream | 358540 | 22236828 ~ 22253486 (-) |
| LOC110537877 | LOC106577478 | coding | downstream | 377102 | 22229800 ~ 22234924 (-) |
| LOC110534479 | LOC106578237 | coding | upstream | 138480 | 22755352 ~ 22774315 (-) |
| si:ch211-79k12.2 | LOC106605590 | coding | upstream | 157636 | 22774508 ~ 22779710 (-) |
| LOC118938460 | LOC106605577 | coding | upstream | 163172 | 22780044 ~ 22791836 (-) |
| LOC110538019 | zn576 | coding | upstream | 177314 | 22794186 ~ 22803401 (-) |
| LOC110538006 | LOC106605591 | coding | upstream | 186575 | 22803447 ~ 22813135 (-) |
| cadm4 | LOC106577561 | non-coding | downstream | 18895 | 22550928 ~ 22749138 (-) |
| G123090 | NA | non-coding | downstream | 36704 | 22481870 ~ 22575322 (-) |
| G123088 | NA | non-coding | downstream | 137822 | 22473454 ~ 22474204 (-) |
| G123044 | NA | non-coding | downstream | 227230 | 22384146 ~ 22384796 (-) |
| G122967 | apoa2 | non-coding | downstream | 255954 | 22354585 ~ 22356072 (-) |
| G123158 | NA | non-coding | upstream | 19170 | 22636042 ~ 22660713 (-) |
| G123247 | NA | non-coding | upstream | 149381 | 22766253 ~ 22767773 (-) |
| G123267 | NA | non-coding | upstream | 200391 | 22817263 ~ 22817587 (-) |
| G123268 | NA | non-coding | upstream | 201194 | 22818066 ~ 22818280 (-) |
| G122972 | NA | other | downstream | 233866 | 22376153 ~ 22378160 (-) |
| LOC110537842 | NA | other | downstream | 454492 | 22120579 ~ 22157534 (-) |
| G122829 | LOC106605673 | other | downstream | 584309 | 22026299 ~ 22027717 (-) |
| G122761 | LOC106578847 | other | downstream | 756125 | 21851433 ~ 21856413 (-) |
| G122733 | LOC106592382 | other | downstream | 799594 | 21796507 ~ 21812432 (-) |
| G123308 | NA | other | upstream | 388114 | 23004986 ~ 23005812 (-) |
| G123435 | NA | other | upstream | 568768 | 23185640 ~ 23199252 (-) |
| LOC110538355 | LOC106577931 | other | upstream | 663307 | 23279116 ~ 23281851 (-) |
| G124840 | NA | other | upstream | 1286967 | 23903839 ~ 23904677 (-) |
| LOC110538705 | LOC106577653 | other | upstream | 1542295 | 24144519 ~ 24172836 (-) |
