Gene
RNA
| Item | Value |
|---|---|
| gene id | G123088 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 22473454 ~ 22474204 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106599311 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142184 | True | 411 | lncRNA | 0.56 | 3 | 22473454 | 22474204 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537898 | LOC106605692 | coding | downstream | 157386 | 22314451 ~ 22316068 (-) |
| LOC110537882 | LOC106577487 | coding | downstream | 219968 | 22236828 ~ 22253486 (-) |
| LOC110537877 | LOC106577478 | coding | downstream | 238530 | 22229800 ~ 22234924 (-) |
| LOC110537752 | LOC106577440 | coding | downstream | 274614 | 22180756 ~ 22198840 (-) |
| LOC110537803 | LOC106577461 | coding | downstream | 298101 | 22172692 ~ 22175353 (-) |
| rps19 | LOC100689943 | coding | upstream | 50980 | 22525184 ~ 22531056 (-) |
| cadm4 | LOC106577561 | coding | upstream | 76724 | 22550928 ~ 22749138 (-) |
| LOC110534479 | LOC106578237 | coding | upstream | 281148 | 22755352 ~ 22774315 (-) |
| si:ch211-79k12.2 | LOC106605590 | coding | upstream | 300304 | 22774508 ~ 22779710 (-) |
| LOC118938460 | LOC106605577 | coding | upstream | 305840 | 22780044 ~ 22791836 (-) |
| G123044 | NA | non-coding | downstream | 88658 | 22384146 ~ 22384796 (-) |
| G122967 | apoa2 | non-coding | downstream | 117382 | 22354585 ~ 22356072 (-) |
| G122973 | NA | non-coding | downstream | 126826 | 22342611 ~ 22346628 (-) |
| G122891 | NA | non-coding | downstream | 293055 | 22179991 ~ 22180399 (-) |
| G123090 | NA | non-coding | upstream | 7666 | 22481870 ~ 22575322 (-) |
| G123149 | NA | non-coding | upstream | 136546 | 22610750 ~ 22624269 (-) |
| G123150 | NA | non-coding | upstream | 137822 | 22612026 ~ 22616872 (-) |
| G123158 | NA | non-coding | upstream | 161838 | 22636042 ~ 22660713 (-) |
| G122972 | NA | other | downstream | 95294 | 22376153 ~ 22378160 (-) |
| LOC110537842 | NA | other | downstream | 315920 | 22120579 ~ 22157534 (-) |
| G122829 | LOC106605673 | other | downstream | 445737 | 22026299 ~ 22027717 (-) |
| G122761 | LOC106578847 | other | downstream | 617553 | 21851433 ~ 21856413 (-) |
| G122733 | LOC106592382 | other | downstream | 661022 | 21796507 ~ 21812432 (-) |
| G123308 | NA | other | upstream | 530782 | 23004986 ~ 23005812 (-) |
| G123435 | NA | other | upstream | 711436 | 23185640 ~ 23199252 (-) |
| LOC110538355 | LOC106577931 | other | upstream | 805975 | 23279116 ~ 23281851 (-) |
| G124840 | NA | other | upstream | 1429635 | 23903839 ~ 23904677 (-) |
| LOC110538705 | LOC106577653 | other | upstream | 1684963 | 24144519 ~ 24172836 (-) |
