XLOC_021119 (tmem59l)


Basic Information

Item Value
gene id XLOC_021119
gene name tmem59l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 21128113 ~ 21150845 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041482
TTTAGATGAAATTTTTAGacagcacttagaggtttttgcatttaaactcttcaTTTATTTCCTAAACAGAACGAGGACACTTCAGTGGAATCACAAGTTATTTTGGGGTGGAATATTTTCATattcaatactttttttatttatttggtttcatTGCTTATTAAACCATTATATTCATCCTCATCAGAGCTGCAGTGTTTCAGAAAAGAAACGTTGTTAGATTGCTTTTTCTCCTTGTAAGCAGCATTTTTTCAGTGCACATGACTTACTGCACTGTACGGAGACGCGCAGCGCGTGCGTGATGATGTGAGGAGTGACGACACGGCGCATCAAAGGCACGAGATCACCGAGGCTGATAGAGCCCGAACCGAAGCAGCAGCAGCGGCAGGAACAGGTCGAGAAGCACCGAACCCCGCAGACGCGCCAGTGCACCGAATCCTGAGGAAAAAAGATGCTCCAGTTCGGCGGCAGGGTGCGCGGAGTTCCCGCACTCGTCTCTCTGATTCTGGTGGCGTTGGCGGCGGCATCATCTGATCTGTTTGACAACCAACTGGGCGATATCAATTACTGCAAAAAGCAATGCCAGATGTCCATCAAAAACAAAAGCCCCGCCAAAGACTCCATCATGAATGCCTGTCACCGCGGCTGCCGGCTCTACTCCATCTGCCAGTTTGTGAACGGAAATACAGGCATCAATACCAGCAAGGAAGAGTGCCAGGGAGcctGCCAGGAGGCCTACAGTAAACTGCTGGAGCAGGAGGCGTGCAGCACGGGGTGTGCCAGCCAGCCCGCTGAGCCGGAGATCAAACGGAGAAAGCTCAAGGCTCTTACCAACCGTCCCAAGCCCATCTCCGTAATGGAGGCCGTGTCTAGCTGGTGCAATGACATCGTCAGCTCCGCCCAGAGTTTTATTTCTTCCACCTGGACCTTCTACTTGCAGGCCGATGATGGGAAGGTTGTTGTGTTTCAGAGCCAGCCAGAGATTGAGTACTCCTTGCCTGAGCTACAAGCCCCGCGCTCCAACGTGGTTGACAAACCCTGGCCTCAAGTCAACTCCCACACACAGCGGCCACATACTGGTGGGCGGTCACATAGGGAGAGGAATGCAGCAAAACCTGGGGTGAAAGGAAAGAACGTCAGCCAACATGCCGAGGACCCAGCTGCTGAGCATGACTTCCTGGGATGCATGTCAAGGCGCTCAGGTCTGCCACGTTGGATTTTAGCCGCCTGCCTCTTCCTGTCTATCATGGTGATGCTGTGGCTTAGCTGTGCCAGTCTTGTCACGGCACCCGAACAGCACATCAAGACTCAGCTCAGCATCAATGGGGATAAAGAGTTCATGGATGACGCTCAAAAGGTCAACCCTTACCACCTGACGCCAGTGATCGCGATGACAATCGCCCAATCAGAAGAGAGCAAGGAGGCGGGGCCACTTCCAGTCAAGGTCGACCTCAGCAAAACATCTCTTTAAAAGCACCGAAGAGATCGACACTTTTGACAAATAGGGTTAAACTCATCTCCAGAGCTATTTCTCGCAATTtaagaggaagtgacatcatttttctaaataaaaataatacaactgCATGACGCCATTTATTATATCGGTTACGACGTATGTCCTGTCTGAATACTAGTCTTCTCACTGAATTTGCAGAAAGAACTGTAGTATAGGTGCTTGTTCACATAATATACTAACACGTTTTCgactataatatatacatacactagTTAACGTCATGAGCAACGTTGCAATGTTTCTTATCGCTAAGTGCACTGTATAAACACGGGCTTAGATGTTAAGTCATGCCACAACCTCAAAAGAATGGTTATTTGTCAAGCTTTAGGGCCTTTAATACTATGAGAAACGTTTAGTTTGGCGATGAATGCTTTCAAAGCGCCCCTCCTTGTTATTAATTAGCGTCGCAATATAAGCTTTGAAGGTGATCTGTCGCACTCGTAGATTCTCGCTTTTGATGTGAAACGAGCAACAGGAAAATTAAATGAAGCCAATTAGCGTAAGATCTGGTTTCATAACGACGTTTACAAAACACGAATGCGTCCTTTGAACTGATATGTAATCAAACTGACAAGGACTCTTAATTGCTTTACAGATTGTGAATGCAGTAGTTTGCTGGATTTTGTTCAGTTGTAcagttaaataaagaaaaaactgtGGTTTTGTACACAGGCAGGTATTGAGgcaaatttctttttttcatatGCATAATTACGCATCCATACTAAGCCTGACTAAACCACTCACATTCATGTCAAGGAAGCATGATgtgtatttattgaattatttatttatgtatttattcaaaaGAATAAAGCAGCGCCTGTAGTCTTTTAGCTCTCGTTTAGATAGCCCATTGATTTGTATGTTACATAATCATAATCCTTTATAGACAGGAAAATGCTTGCTGTTCAGACCGAATGTGAATTGTTGTATTATTCCAATGCCTTTCTCCCCCCCTTAAATATTCTCCATCTCTGCCCGGTTTATTGTGGGTGGAGTTTGGGGCGGGTTTTGAATGCCCAGCCACCAGGCTTTGACAAATATCTTTTTGTAACTAGACTGTAGGATTGAGGAGCTTTCATGGCACTATTTGTCTTGTGCTGCTATTCGCCCCATTTAAGCCCAGCCACAGTGCATGCTAGTACGCTATGAGACATTGAATATATCGTCCCATCTATTTTGGAAACAAACTGCTGTACGCTCGTGATCTTTGTGTTTTTGCTTAATGTTCTGTAGGCATTGTAATTATGACCATAGATTACTAAGAAGAGGTGAGATTCCTTACTTATAAGCCATTTAATATCTACTGGTACATCGTTACTGTATGAAATACAAGTTGGTaatatctttttatttctttcttttgaatAGTTTCCCAAAAGAAACTCCATAATATCGGACAAATAAAGTGTTTTCATGTTGTAA

Function

symbol description
tmem59l Acts upstream of or within axon extension. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human TMEM59L (transmembrane protein 59 like).

GO:

id name namespace
GO:0048675 axon extension biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2651 Acts upstream of or within axon extension. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human TMEM59L (transmembrane protein 59 like).

Ensembl:

ensembl_id ENSDARG00000003655

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041482 True 2947 mRNA 0.44 8 21128113 21150845

Neighbor

gene id symbol gene type direction distance location
XLOC_021118 NA coding downstream 7017 21119896 ~ 21121096 (-)
XLOC_021117 CU693455.1 coding downstream 9097 21118902 ~ 21119016 (-)
XLOC_021116 ssbp4 coding downstream 81270 20951211 ~ 21046843 (-)
XLOC_021115 fkbp8 coding downstream 177665 20925849 ~ 20950448 (-)
XLOC_021114 ell coding downstream 203366 20847580 ~ 20924747 (-)
XLOC_021120 rex1bd coding upstream 16251 21167096 ~ 21176269 (-)
XLOC_021121 cks2 coding upstream 162487 21313332 ~ 21314860 (-)
XLOC_021122 ankrd24 coding upstream 208319 21359164 ~ 21392748 (-)
XLOC_021123 s1pr3a coding upstream 324803 21475648 ~ 21476836 (-)
XLOC_021124 NA coding upstream 393365 21544210 ~ 21547893 (-)
XLOC_021107 NA non-coding downstream 580573 20522204 ~ 20547540 (-)
XLOC_021106 BX088720.1 non-coding downstream 637556 20490441 ~ 20490557 (-)
XLOC_021094 NA non-coding downstream 1490084 19622740 ~ 19638029 (-)
XLOC_021128 BX649295.1 non-coding upstream 782280 21933125 ~ 21937488 (-)
XLOC_021129 NA non-coding upstream 799857 21950702 ~ 21955166 (-)
XLOC_021130 NA non-coding upstream 869664 22020509 ~ 22125740 (-)
XLOC_021137 NA non-coding upstream 1191540 22342385 ~ 22523455 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G159675 NA non-coding CI01000030 null 4147039 ~ 4150826 (+)