G141392


Basic Information

Item Value
gene id G141392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39788040 ~ 39788730 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU162521
cctctagatgttggaacatcgctgcggggacttgcttccattaagCCACAAGAGCAGTAGTGAGGTagggcattgatgttgggcgattaggcctggctcgcagtcagtgttccaagtcatcccaaaggtgttcgttggggttgaggtcagggctctgtgcaggccagtcaagtttttccacaccaatctcgaaaACCATTTAGTATGGACCGCActttgctgaaacaggaaagggccttccccaaactgttgccacaaagttggaagcacagaaacgtctagaatgtcattgtatgctgtagcgttaagatttcccatcactggaactaaggggcctagcccgaaccatgaaaaacagccccagaccattattcctcctccaccaaactgtatagttagcactatgcattcggTCAGGTAGTCTTCTCCTGGCATTCACCAAAACCATATTTTGTCAttcatgaaaacccatttcatgaagctcccgacgaacagtttttgtgcggacgttgcttccagaggcagtttggaactcggtagttgCTATTGCGAGGACAGGTGATTTTTACTCGctgcgcgcttcagcactcggcggacctgttctgtgagcttgtgcggctgagccgttgttgctcattgacgtttccacttcacaataacagcacttacagttgaccgggacagctctagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162521 True 691 lncRNA 0.38 1 39788040 39788730

Neighbor

gene id symbol gene type direction distance location
nr0b2a LOC106605079 coding downstream 232607 39553803 ~ 39555433 (-)
LOC118940039 NA coding downstream 286552 39499737 ~ 39501488 (-)
LOC110501545 NA coding downstream 290479 39487555 ~ 39497561 (-)
si:ch211-154o6.3 LOC106605084 coding downstream 322434 39449495 ~ 39465606 (-)
LOC110489516 LOC106605085 coding downstream 338706 39442306 ~ 39449334 (-)
LOC110489623 zadh2 coding upstream 25393 39814123 ~ 39821845 (-)
LOC110489634 LOC106605073 coding upstream 215040 40003770 ~ 40078999 (-)
LOC110489653 LOC106605072 coding upstream 436343 40224622 ~ 40298333 (-)
LOC110489712 LOC106605066 coding upstream 1065485 40854215 ~ 40861194 (-)
LOC110489774 LOC106583729 coding upstream 1079159 40867889 ~ 40907134 (-)
G141389 NA non-coding downstream 1661 39785904 ~ 39786379 (-)
G141386 NA non-coding downstream 3792 39784030 ~ 39784248 (-)
G141371 NA non-coding downstream 16436 39771312 ~ 39771604 (-)
G141369 NA non-coding downstream 18005 39769640 ~ 39770035 (-)
G141364 NA non-coding downstream 20975 39766844 ~ 39767065 (-)
G141833 NA non-coding upstream 60664 39849394 ~ 39849831 (-)
G141895 NA non-coding upstream 176223 39964953 ~ 39965260 (-)
G141913 NA non-coding upstream 201719 39990449 ~ 39990754 (-)
G141925 NA non-coding upstream 219650 40008380 ~ 40013614 (-)
G142069 NA non-coding upstream 427336 40216066 ~ 40216322 (-)
G141363 LOC106605077 other downstream 22567 39763933 ~ 39765473 (-)
G140879 NA other downstream 723622 39063862 ~ 39064418 (-)
G140479 NA other downstream 959845 38827909 ~ 38828195 (-)
LOC110489105 LOC106605178 other downstream 1739374 38046700 ~ 38048666 (-)
G139231 NA other downstream 2035082 37747441 ~ 37752958 (-)
G142918 NA other upstream 1074484 40863214 ~ 40863721 (-)
LOC110489860 LOC106605053 other upstream 1925816 41714269 ~ 41730507 (-)
G145010 NA other upstream 2918088 42706818 ~ 42707279 (-)
G145767 NA other upstream 3481987 43270717 ~ 43272516 (-)

Expression


Co-expression Network