LOC110489623 (zadh2)


Basic Information

Item Value
gene id LOC110489623
gene name zadh2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39814123 ~ 39821845 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110489623
CAATCTTCTTAATTGTCTTGTTTTTCCTCTGATTAAAATTGAAATGACTTGACAAAGGAATGCTTGCATCAGTAGGCTAATATCAAAATGTTGCTTTGAAATATTGATCCACAAACTTCATGCGGAATGTTATGGCAATTAGTCAATTATTACAAAACTGTTACTAGGTTAGGCTATATTACTACAATtagctcatcatcatcatcatcatatgaAATAAACTTACACCAACTTTATTTTGCCTGACATATGCTATCCTATGTCAAACCCAACATGGCAATGCTTTGGACTTGCATATTTTTGGAACATTCGGACTGAAGTTTCCTAATGTGAGAGCACCATAATTTACGCATGCTTGAGGAGAAAATATATCCTGCAGATAATAGCCTTTTAACGGTGCTTGTTAATACCTTGAATGGTTGTGGTTGGCACTGGCTGTATTGGCAATTCTTTGGATTTTTGTGTACAATCGTCGAGGATATGTTTGAGACTACGATTGATTTGTTTCACCTTTACTAGGAAGTGTGTCATGTCCAGGAAGGGGAGGGACTCCAAAGAATACAAGCCGCTACAGTGACAGCTGCTACAAGATTGCGCCGTgctatagcctagttatcatcaaGGCAAACATTCCAAAAGCACGCTATTGCGTGTCAATCTTATGCGACAAAACTGCGCTGGTAATATTGTTTTAATTGCAATGCATCATTGCATTGGCGTGGCCTACCCTGCTACGTGAAGAAAGCCTAGCATAGGCTAACGATAAGCATATTGATATCAATGCACAGCCAGTGCCCGTGAACTTTGTCACATAATCCCTCCCTGGTGCAATGTCCACCTCTTTCTTGTTGAGAAACGGTAAGAGGGTGTTTTCGGTAATCGGCGGGGGGTGCAGAGGAACCGATGCACTTTCTAGAGTTCATTTCGTATCGCGCCGCTTCATTATAGATTTGTCATACTCCACGCACTTCATGGATTTTAAAGGTTCCTCGATACCGAGCTCCATGAAAAAGCTGGTCGTAACGAAGCTCAGCCAGAATTTCAGAGACGCCGTTGCCTTGCAAACTGTTCCAGTCCCGACACCTGGCGACGGGGACTTGCTTGTCAGAAATCGATTTGTTGGAATAAATGCCTCGGACATCAACTACTCAGCAGGCCGCTACGACCCTTCGGTGAAGCCACCGTTTGACGCCGGGTTTGAGGGCATTGGCGAGGTGGTCGGACTCGGCCTGAGTGCCAGCGCCCGCTACACCATTGGCGACACCGTGGCCTACTTTGCCGATGGGGCCTTTGCGGAGTACGGTGATACCCATGATCAAGACCGTACCCGTACCCGCGGTGAAGCCAGagttcctcaccctgctgttaagTGGTGCCACGGCCTATATCGCCATGAAGCGGCTTGGCGACCTGGTGAAGGGCGAGACGGTGCTGGTGACGGCCGCTGCTGGTGGCACAGGACAGTTTGCTGTGCAGTTCGCCAAACAGGCCGGCTGCCACGTTGTGGGCACCTGCTCCTCCAATGAGAAGGCTGGCTTCTTAAAGACCATTGGCTGCGACAGGCCCATCAACTACACGTCCGAGGACCTGAGCACCACGCTGCGCAAAGAGTACCCACAAGGCCTGGACGTAGTCTACGAGTCCATAGGTGGCAGAATGTTTGACATGGCGGTCAACAATCTGGCCAATGAGGGTAGGCTGATCGTGATCGGATTCATCTCAGTGTACCAAACGGCAACAGGGGTCCCAACTGTTAAAGGAGGAACTCTGCCCATGAAGCTGCTCCAGAAGTCAGCTAGTGTGAGGGGGTTCTTCCTACCTCACTTCCTGTCCGACTACAAGGAGGCGATGGGAAGCATGATGCAGATGTTTGCTAAAGGGAAGCTGGTGTGTGAAGTGGACTGTGGCGACATGGCCCCCGAGGGCCGTTTCATGGGACTGGAGTCCGTCTTTAGGGCTGTGGACTACATGTATGCTGGGAAAAACGTGGGaaaggtggtggttgaggtgacTCCACCCTCACTGGACAGCAAACTGTGGTTTGCCTTAATGGGAATGCACTGGAATTCTCAAACAAATctaatgtatgtatgtacaatGAAAGGAACAATGAAAATACAGAATctaatgtatgtatgtacattGAAATGAACAATGTAAGTATATATGTTGAAGGCAAATTACCCGAACTGTGACAATCTACATTACTCTGAATTTAATATATTTTTGAACAGTTTATTTCACCTGAATATATTTAGATATTACTAAAATGTTGTTCTGTTAGAGAACAGTTCCTTGTTTAATGTTTTAATGATTAGCTTTACTTTATTCAATAGAAAGTCCCAATAAATGAGGATCATACTTGTAGAGGGAAGATTGCTGGTGTAACAACATAGGTTATCTCAAGAAAATAATGCTGTACCCCTCTAGATCAAATGCCTCCCTCATTCtatctcgcacacacacacactcacttgttTCTTTGCTCTGTGCTCAAGACTAGAGCTAACTAAAATGTAACCATATTAACGTTTGTGTTGACAGTAACTAGACCCGTGTCTGCATTGACTGTCCACAGCTTACGCATGATTACAGCACTCCAGACAATGTACCAGCATATCAGCTGAACCTTCTGTTTACACAGCTGAGGACAATATTGCATAATGATCACATTTAGTGTTACCAGTTTAAACCTCTGTCATTCTTTTGGAATATAGGCCTAAGCATGCCCAGAGCAATTGACCcgtttagtcccccccccccccccccccccccccacacacgtATGTACGTACAGCATGCATAAACAGATAATTTattaaatatatgaatgagtcatCTTAAATCAACAGAACATATTGCACATTTCTCTATGTATTGTAGGTGTAGAGTAAGTTTTAAAATGGCTAATTTTGAGGAGTAATAACACGTGTAATTAACACTAATATCTAGATTACATTATTTATCTTACATTCTTGATTTTAgaatcacattttgttgtgtttggtTTTAGTAAGATCTGTTAATACTTGTCAGAACTGAATGCAGCATCAGGTGTGCTTGGTATTTTATAGCATGTATGTAGCTGATCGAAACAGCGTTCATATAATCCATCTTTCCATTCACATGCCCCAAGCTGACCATAATAAAAAATTAGTCCAGCTAACCAGAACTTGGGGTTGAAAATACCATTCTTCTTTCCCACAAGAAGCAGAAACCCACTTATATTGAATGTATTGTGGAATGCCCTCTGAGGTAGGCCTACAGTTTTCTTTTTTGTTTGTTACCGTGAGGATAAGGTTCCACTTGATGTTTTGGATTCTCTTTAAAGCCAATTCAcaaatttcattttttttgtcatttaaatATGGAACCCTTTTAAGCTAAATATCATGTTGTCGCCTATAGAGGTGAGGGTAGATTGGAGACTAGGTGGGATACAATCATCATGGAGAAATGCCTTATCTTACATTTTCCATATTAATTCTAAAACTATTTACAAGTTAATGTGGGGGTGTTATTCTGTGGCTTTTTTTAAGAAGTGAGAAAAGGTAATTAAAACATCTCTAAGACAATACGTTATCTATCAAGCCTAggaacacaaaaacaaacacctGTTTCCACCTGGGAGGGACGTCTGTGTGTTCATGCACTGTGAACATGCAATATCCTCCTCCAGGTGGCCACTCAAAAAAGATCTCGGTGTGAAATACGTTACAGGTGTGACCCCAGCATGCAAAGCCTCTACCTTCGCCAGGCAGGCAGCTCAGGAAATCAGAAACATACCCACCAGCCTGAAGCCATTTGAACCTGCACCAGtgtgtgtctcacacacacacacccatatgtGTTCCAAGAGAGAAGTGGTCTGTGTAATGCATACAGTGTATTTTTGTAGATTGGTTCTTACTATCTTtagtaaaaaattaaaaattaaaattaaGGTCCTCTTTGATTTCTACCCGTGTTAAATATATAAATGAAATTATCCATCTCTGCACCCATCATTGTAAGTGTTTCATAACAGTGCCACTGTACAAGCATACATGACTATGAGCAACCTGAAAGCTATTGTTAAGGCAGATGCTCTTACCGCTCGTAAAATGTATGGTTCAAGGCGTCATTGTAATGCAAGAGCATGCTCTCACACGCTAGTCACACAAAGGTGAGAGAGGTGATACAAATGTTCACTTGAATTTAACGTGCTTGAGTACTATTGCGTGCATACTCTGGATAGAGGTACGGACTGTCAATGTGTATCTGTCTTCAATTACCAACCGAGGCCTCACTCTGGTCCTCCGGGGCCCACCTGTAGCAGCCATGATTAGTGCGCATTCACAGTCCAATTAAAAGCACAGGACAACCTGGAGAAAACAACACTCTTTAATTGGCTTGTAGCTGTTAGCAGGCTCTTAACAAACCATATAGACACATACCTGTTCTGAGGTACATGACAAATGTTGGTGGAGTGACAAACATGTTTTGGAAAAGTGTCGCGTTTCTCAATGTAGTTTGAGAATATtagttattgttttttttattgcttAGACTATAGTTATGTTTTTTtgagatacagtatattacatccACCTTTAACCTGAGTATAGCCCTTAATTTAACCCTAAAAGTAAGATTGAAAATATTATATGGTAAATGTGAAACAACCACAACAATTGTGAGAGAAAAGTTCAAATCTAAAATAAATGTCCAAAAGTGCATGTCATGAATAGTTGTGATACTTGGTTTGCCAGAGATCTGTGCTTTGTGCATTTCGGATACACGCTCAAAATGGGATCTGTGACCTTTTTACAGCCTTGCTTTCAATTCAATTGAACCATATAATTGTTGATTAAATGAATAAATTGAAAATgctgtcaacagtttagtgaAATGCCAGTGTTGTAATACATCAAATCAATTTGATCAGCTGGGTACTCTATATATTCAATCAACCTCAGTGTTACTTTAGGCTCTGCCATCCATGTTCCTATACTGGCACACCTAACATAGACATCATTTGGATGGTGTGGTCTGGTATAACCTGGTGCCTTAGTGACTGACTCTGTCATGGCTCAGGTCCACTCTCAATTACTAAGAGTCACTCAGACCCCTCAACCACCATCACTCCTCCCCCTGTTACAAAACCTCACTGAACTAATTAGTCAATGCACACCCAAACACTAAGTTAAGGTAAAAACAGGTGACTTTCCGATatgtaataaaaaatatataataatatgttACTTTTACTCATGTTGTATTGCAtagaaataaactcagcaaaaaaaagaa

Function

symbol description
zadh2 Predicted to enable 13-prostaglandin reductase activity. Predicted to be involved in negative regulation of fat cell differentiation. Predicted to be located in peroxisome.

NR:

description
prostaglandin reductase 3-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110489623 True 5292 mRNA 0.42 2 39814123 39821845

Neighbor

gene id symbol gene type direction distance location
nr0b2a LOC106605079 coding downstream 258690 39553803 ~ 39555433 (-)
LOC118940039 NA coding downstream 312635 39499737 ~ 39501488 (-)
LOC110501545 NA coding downstream 316562 39487555 ~ 39497561 (-)
si:ch211-154o6.3 LOC106605084 coding downstream 348517 39449495 ~ 39465606 (-)
LOC110489516 LOC106605085 coding downstream 364789 39442306 ~ 39449334 (-)
LOC110489634 LOC106605073 coding upstream 181925 40003770 ~ 40078999 (-)
LOC110489653 LOC106605072 coding upstream 403228 40224622 ~ 40298333 (-)
LOC110489712 LOC106605066 coding upstream 1032370 40854215 ~ 40861194 (-)
LOC110489774 LOC106583729 coding upstream 1046044 40867889 ~ 40907134 (-)
LOC110489723 NA coding upstream 1106371 40928216 ~ 41111980 (-)
G141392 NA non-coding downstream 25393 39788040 ~ 39788730 (-)
G141389 NA non-coding downstream 27744 39785904 ~ 39786379 (-)
G141386 NA non-coding downstream 29875 39784030 ~ 39784248 (-)
G141371 NA non-coding downstream 42519 39771312 ~ 39771604 (-)
G141369 NA non-coding downstream 44088 39769640 ~ 39770035 (-)
G141833 NA non-coding upstream 27549 39849394 ~ 39849831 (-)
G141895 NA non-coding upstream 143108 39964953 ~ 39965260 (-)
G141913 NA non-coding upstream 168604 39990449 ~ 39990754 (-)
G141925 NA non-coding upstream 186535 40008380 ~ 40013614 (-)
G142069 NA non-coding upstream 394221 40216066 ~ 40216322 (-)
G141363 LOC106605077 other downstream 48650 39763933 ~ 39765473 (-)
G140879 NA other downstream 749705 39063862 ~ 39064418 (-)
G140479 NA other downstream 985928 38827909 ~ 38828195 (-)
LOC110489105 LOC106605178 other downstream 1765457 38046700 ~ 38048666 (-)
G139231 NA other downstream 2061165 37747441 ~ 37752958 (-)
G142918 NA other upstream 1041369 40863214 ~ 40863721 (-)
LOC110489860 LOC106605053 other upstream 1892701 41714269 ~ 41730507 (-)
G145010 NA other upstream 2884973 42706818 ~ 42707279 (-)
G145767 NA other upstream 3448872 43270717 ~ 43272516 (-)

Expression


Co-expression Network