G144424


Basic Information

Item Value
gene id G144424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42134160 ~ 42134744 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU165745
CATCGGCAGTtgtcgcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactaagtGCGTACATTTTTTTGTGGTGTATGTTTGTAGCGTGCTCTAGTGTCTCTCACCAGTTCAGTGATCATGGTGGGCCACAGTGAGGTGAGGTGTTGAGGAGACATGCGCAGCAGTAGAACTCTGAAGAACAGGAACACCTGGGCATGGAGGATGGGCACCTGGGGCAGACGCAGACTCTCCACCAGCCGCTCTGATaggggaaacacacacactcataagtCAATACTccatcgctgtgtgtgtgtgtgtgtgtgtgtaaatatttgAAAACAGAaggatgtgtgtgtttatttcttagaggcgtgtgtgtgtgtgttggtaagcaggggtatgtgtttgtgtgcatgcctgtctgtatgctgtctgcATGTGTGCGTTTACCCTGTATGTCAGGTAGGTATTTCTGGTACTGGTCCACCTCGCTGCTGTAGATGGTGAAGGCTAGGCGTTTGAGCAGCATTGCTCTCTGCTCCAGCTCTGCGTCTCGGTTAGAGAACAGATTCAGAGAGCTGCTCTGAGCCACCGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165745 True 585 lncRNA 0.51 1 42134160 42134744

Neighbor

gene id symbol gene type direction distance location
LOC110501561 LOC106605047 coding downstream 33865 42085411 ~ 42100295 (-)
LOC110489894 LOC106605044 coding downstream 103319 41994937 ~ 42030841 (-)
LOC110489886 LOC106605049 coding downstream 164210 41963722 ~ 41969950 (-)
LOC110489860 LOC106605053 coding downstream 403653 41714269 ~ 41730507 (-)
LOC110489843 LOC106605054 coding downstream 446627 41679632 ~ 41687533 (-)
LOC110489954 LOC106605048 coding upstream 82903 42217647 ~ 42223758 (-)
LOC118940237 NA coding upstream 179347 42314091 ~ 42340473 (-)
LOC110489971 LOC106605027 coding upstream 360722 42495466 ~ 42501897 (-)
LOC110489980 LOC106605028 coding upstream 375578 42510322 ~ 42517281 (-)
LOC118936750 NA coding upstream 551395 42686139 ~ 42687000 (-)
G144422 dopey1 non-coding downstream 1119 42132169 ~ 42133041 (-)
G144397 NA non-coding downstream 39229 42094492 ~ 42094931 (-)
G144324 NA non-coding downstream 165973 41967890 ~ 41968187 (-)
G144177 NA non-coding downstream 307359 41770936 ~ 41826801 (-)
G144195 NA non-coding downstream 364189 41769630 ~ 41769971 (-)
G144425 NA non-coding upstream 457 42135201 ~ 42135428 (-)
G144426 NA non-coding upstream 1626 42136370 ~ 42136577 (-)
G144427 LOC106605043 non-coding upstream 1946 42136690 ~ 42138167 (-)
G144428 NA non-coding upstream 3615 42138359 ~ 42138570 (-)
G144459 LOC106605045 non-coding upstream 50100 42184844 ~ 42186118 (-)
G142918 NA other downstream 1270439 40863214 ~ 40863721 (-)
LOC110489653 LOC106605072 other downstream 1892756 40224622 ~ 40298333 (-)
G141363 LOC106605077 other downstream 2368687 39763933 ~ 39765473 (-)
G140879 NA other downstream 3069742 39063862 ~ 39064418 (-)
G145010 NA other upstream 572074 42706818 ~ 42707279 (-)
G145767 NA other upstream 1135973 43270717 ~ 43272516 (-)
LOC110490183 LOC106605015 other upstream 1238096 43372725 ~ 43392160 (-)
LOC110490298 LOC106605170 other upstream 1641319 43776063 ~ 43783884 (-)
LOC110490352 NA other upstream 2300046 44434790 ~ 44464449 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G312339 NA non-coding NC_047615.1 CM018561.1 264535 ~ 269311 (-)