G144995


Basic Information

Item Value
gene id G144995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42681408 ~ 42683345 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU166453
AGTCATCAACCTTCTGTTTATTTAAAATTAAAGCACCCAGTTTTGTCGTAGTAGAGGTGCAACCTTTTTTCAATAGTTACTTTAGTGATTTGAGTGTGACCAGACCACGTTTCCACAGATAAAAGAAAATGTAATCCAAAAAGCAGACATTCACATAACTGCCACTTAATAAAAAGGGAATTGAAAGATGGAGATAAGATTCTGTTTAAAATAAATATGGCTTTGCATGTGTCAATCAAGATGACAGATCTGCATGGGTTTCTTCACTGGTCAAATAAAGCTATAGTGAGGGACCTGGGATTTGCTAGTAACTTTGGTAGAGGGCAGGAAGCAAAGCATTACAAATCACTGACACACATGGACACCACATTCAGTCATGAATATAAGGCACAAAAATACTTCACATACTAGCTAGCATGTGCTCAAAATGAAACTTCAGGTTTTGCATAAAGATAGATTCAGCTATAAAAAATTTCAGTAGCTGCATATCAGGCCGATATCCACAACAACAAAGATAGTGAAGAGAGGGGATAAGAGAGGCTAATCTACTCCGCAGTAGTTGCCCCTCGATTATCACATTTGCAGGAGAGTGAAACGACCTCCCATGCACATGCGAAGATGTTCTGTATGGGAATGTGGGTGCTCACAAGTACAGCCTATTGTATAGCGTTTATTCCTCAATAGCTTTGTTTCAGTTTAAAGGAAATGCTTCATAGCATTGGAGATGTGCAATAATATACTACAAGATCAATAAATAATTAAGGAAAGTGATATAATTTTACAATCATACAATTTGCACAATATTCAACATCAAATAcaccccaaaaatgttttgtctCAGTATCAGTGCCAAATGTAAATTTTTATGAACTCCCATAATTTTTGTTGTCTCAGAACAAACTGTGGCAGTGGAAATCAAACAGGACTCAAATGTTTCGcggacaaaaataaataaaacaaattaaaacaatataaacaaaataaaaaccctgagATTTCAGATTCAGATGCAACATTGAGGTCACCCATTTTACTAAATGCGTCACAGGGTGGTGGGGGGTGGGCAGATGACAAGCAGCCACCAGATGTGTCAGTTACCGGCTGACCAATGATGAAATCTAGCGGCTTTGGCAGCCGTGACCCTGATTTCAAACAGTTTTACTCTTAAGACTCTTTCTTGCATTCAGCGGCTTGACACGAGGAGACTGTGTTGAGGTGTGGGTGAGGTGTTCAGCTGATGCTTAGGGCACCACAACACTCCTAACCATTCAGTCCACATTACAATAGGCCTCAGTGCTCTCAGCCATCAGGCCCATTCATTCTACCCACTGGAAATCCAGTAGTACTCTACCCTGCTAGTCTAAATTAGCACCTCCCCCTGGTGTCCCTGTGTCACTGCCCCTGTGTGAGGGTGGGGCTGAGTGAGGTCACTGGGTAAAGCTCTTCTTGATGGCCACGTTGGGGAAGAGTCCGCAGAGCTCTTGGACGATGCGGGCGTCCACCTGCGAGCAGAAGGACACGTCCAGGAGGAGGAGCTTAGGACACGCCTGCAGCAGCTTCCTCAGGGAAGAGGAG

Function

NR:

description
F-box/LRR-repeat protein 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166453 True 1575 lncRNA 0.42 2 42681408 42683345

Neighbor

gene id symbol gene type direction distance location
LOC110489980 LOC106605028 coding downstream 164127 42510322 ~ 42517281 (-)
LOC110489971 LOC106605027 coding downstream 179511 42495466 ~ 42501897 (-)
LOC118940237 NA coding downstream 340935 42314091 ~ 42340473 (-)
LOC110489954 LOC106605048 coding downstream 457650 42217647 ~ 42223758 (-)
LOC110501561 LOC106605047 coding downstream 581113 42085411 ~ 42100295 (-)
LOC118936750 NA coding upstream 2794 42686139 ~ 42687000 (-)
LOC110490045 LOC106605033 coding upstream 40733 42724078 ~ 42727549 (-)
LOC110490051 LOC106581764 coding upstream 96065 42779410 ~ 42792775 (-)
LOC110501576 LOC106605029 coding upstream 239323 42922668 ~ 42962273 (-)
clec3ba tetn coding upstream 301064 42984409 ~ 42986551 (-)
G144968 LOC106605035 non-coding downstream 38715 42640499 ~ 42642693 (-)
G144941 NA non-coding downstream 88804 42588558 ~ 42592604 (-)
G144654 NA non-coding downstream 267406 42413717 ~ 42414002 (-)
G144621 NA non-coding downstream 283258 42397901 ~ 42398150 (-)
G144609 NA non-coding downstream 292571 42388636 ~ 42388837 (-)
G145015 NA non-coding upstream 34389 42717734 ~ 42717959 (-)
G145019 NA non-coding upstream 37375 42720720 ~ 42720929 (-)
G145025 NA non-coding upstream 48023 42731368 ~ 42731714 (-)
G145026 NA non-coding upstream 48791 42732136 ~ 42732458 (-)
LOC110489860 LOC106605053 other downstream 950986 41714269 ~ 41730507 (-)
G142918 NA other downstream 1817687 40863214 ~ 40863721 (-)
LOC110489653 LOC106605072 other downstream 2440004 40224622 ~ 40298333 (-)
G141363 LOC106605077 other downstream 2915935 39763933 ~ 39765473 (-)
G140879 NA other downstream 3616990 39063862 ~ 39064418 (-)
G145010 NA other upstream 23473 42706818 ~ 42707279 (-)
G145767 NA other upstream 587372 43270717 ~ 43272516 (-)
LOC110490183 LOC106605015 other upstream 689495 43372725 ~ 43392160 (-)
LOC110490298 LOC106605170 other upstream 1092718 43776063 ~ 43783884 (-)
LOC110490352 NA other upstream 1751445 44434790 ~ 44464449 (-)

Expression


Co-expression Network