XLOC_002116 (FP102052.2)


Basic Information

Item Value
gene id XLOC_002116
gene name FP102052.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22938231 ~ 22956370 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004111
atgaggACTAAGAGGTGTCAACATGAGTCACTTCCTGACCTAGCTGACCCCGCTTGCAATGAAAACTGCTCTGCAATCCGCAAACTCAACTCTTCCCACTGCATGATGGGAAGGTCGTGGTCACCCAGAGGAGACTCTTCTTCACTTTGCTGTCTAGTCCCCTGGTCAGAGGGTGAGGGGTCATCGGTGGTCCTCAAATAACACCTGTCACTGTCTGGATTCTCCTCCATCCGGTGGAGAGTGATGCTGGTCCAGCAAAGACAGGCTAAAGCAgatgagaggggggggggggatttttTGATGAAGTTTAAAAGAACAGCATATATttgaaacagaaacattttgtcACATTAGATATTATAAGGATGTTTCTgagatttttgtcaaaattgactTATTGacattaaatgacaacttatttacattattagatgtttttttataagttgtttacattttaagacttaaaaaaaaggCTTTATCTACAAATTCGAACTCTAACTTGGCTCTacaaggttctttctgtgagccaatcagcattttgaatGCACGCACGAGAACAATCAgaatcagctttctttgtcatttcacattGCTACATTGACAGCGGGcaaagaccagaaagaaacacaaaatacaaaactaagTAATGgtgcaccacacaaaattgagaagaaacctgaaactAAAAAGCTGTGTGTCagtgtgatgatttagaagcgtttttgacattgagatgaaatgtttaattttacattGTTAAAGAAGCaacaggaacaaaaaaaaaaaaaatatatatatatatata
>TCONS_00005890
AGAGGTGTCAACATGAGTCACTTCCTGACCTAGCTGACCCCGCTTGCAATGAAAACTGCTCTGCAATCCGCAAACTCAACTCTTCCCACTGCATGATGGGAAGGTCGTGGTCACCCAGAGGAGACTCTTCTTCACTTTGCTGTCTAGTCCCCTGGTCAGAGGGTGAGGGGTCATCGGTGGTCCTCAAATAACACCTGTCACTGTCTGGATTCTCCTCCATCCGGTGGAGAGTGATGCTGGTCCAGCAAAGACAGGCTAAAGCAga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117611

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004111 False 808 lncRNA 0.38 3 22938231 22956370
TCONS_00005890 True 265 lncRNA 0.53 2 22942413 22955837

Neighbor

gene id symbol gene type direction distance location
XLOC_002115 zgc:103508 coding upstream 12192 22918338 ~ 22926039 (+)
XLOC_002114 med11 coding upstream 22135 22912251 ~ 22916096 (+)
XLOC_002113 arrb2a coding upstream 30813 22890791 ~ 22907418 (+)
XLOC_002112 ap4m1 coding upstream 76153 22854803 ~ 22862078 (+)
XLOC_002111 AL807389.1 coding upstream 90827 22847272 ~ 22847404 (+)
XLOC_002117 NA coding downstream 3919 22960289 ~ 22965426 (+)
XLOC_002118 si:dkey-175g6.2 coding downstream 65893 23022263 ~ 23026529 (+)
XLOC_002119 NA coding downstream 77959 23034329 ~ 23039290 (+)
XLOC_002120 slc25a1a coding downstream 104021 23060391 ~ 23069323 (+)
XLOC_002121 LTN1 coding downstream 142995 23099365 ~ 23215879 (+)
XLOC_002110 NA non-coding upstream 99750 22834311 ~ 22838481 (+)
XLOC_002106 NA non-coding upstream 316940 22620330 ~ 22621291 (+)
XLOC_002102 NA non-coding upstream 561203 22373301 ~ 22377028 (+)
XLOC_002101 NA non-coding upstream 658783 22275913 ~ 22279448 (+)
XLOC_002122 CT827808.1 non-coding downstream 461463 23417833 ~ 23417947 (+)
XLOC_002128 NA non-coding downstream 586247 23542617 ~ 23544066 (+)
XLOC_002131 NA non-coding downstream 632305 23588675 ~ 23591058 (+)

Expression


Co-expression Network