XLOC_002119


Basic Information

Item Value
gene id XLOC_002119
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 23034329 ~ 23039290 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004113
GGCAGATGGGGTAAAATGTCCCCCAGGGGTGTTTATCCTCAGCTGAGGCGTCCAGACTGAGGCAGACACGGCCTGACACCTGAGCTCCGCCGCTGTCACTCTTTACAGCAAATCTGCTTGTGAGCCATTTGAGATTCATTAAATATTGAAGAGCCACAGTTTCCGTTCCGTGAGAAGAAGAGAAGGGGTTAGAGAGACACAATGAAAGAGCAGATCCAACAAAAAGAGGTTGAACACACGGAAACGGGAGGTCAGCGAAATGGCAGGGACTGTGAATGGCGGTCAAGCGGCCCAAATGGGAACGAGTCCAACTGACCAAAGCAGCAGTGAACAAAACTCTCCACAGGACCAACAGGAGAAGGCCTGCTCATGCGAGGATGGGAGCTGTTGTGTTAGTGAGAGTGTCAAACAGCAGAAACCCGAATCCACTCAGACCCCAAACATTACACAGGCCTTGGCAGCGactcctgtacacacacacagtacgTCTGAAACTGCTGATAAATGCGTACACTGATGATCAGACCGATAAGGTACATTAAAAGTGCTGAACAGTTTGTCCTTGTGCAAATTTTCAGCACTGAAATGCAAATGCTGTTTATACAGGTGCATGACGGGAAACAAAGGCCGGCACACAGGCTGTTTACTTTGGGCTATTTTCGGGGTGTCTGTTCTGTGGTCAAAATAAAACCTTGTAGAAACAGCAGTATGTGCAGAGTAATATATCACTGGTAAATCCCCACAGATTggcatataattcattcattcattcattttcctttggcttagtctctttactcataaggggtcgccacagcggaatgaaccaccaccttagcatatgttttacacagcggatacctttccaaatgtaacccagtactgggaaaaatccatacacactcattcacacacctaTACACTAtagtaaatttagtttatttaattcacctatagtgcatggactgtggggaaaaccggagcacccggaggaaacccacgccaacgcgtg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004113 True 1012 lncRNA 0.47 3 23034329 23039290

Neighbor

gene id symbol gene type direction distance location
XLOC_002118 si:dkey-175g6.2 coding upstream 7800 23022263 ~ 23026529 (+)
XLOC_002117 NA coding upstream 68903 22960289 ~ 22965426 (+)
XLOC_002116 FP102052.2 coding upstream 77959 22938231 ~ 22956370 (+)
XLOC_002115 zgc:103508 coding upstream 108290 22918338 ~ 22926039 (+)
XLOC_002114 med11 coding upstream 118233 22912251 ~ 22916096 (+)
XLOC_002120 slc25a1a coding downstream 21101 23060391 ~ 23069323 (+)
XLOC_002121 LTN1 coding downstream 60075 23099365 ~ 23215879 (+)
XLOC_002122 CT827808.1 coding downstream 378543 23417833 ~ 23417947 (+)
XLOC_002123 si:ch73-122g19.1 coding downstream 402198 23441488 ~ 23443074 (+)
XLOC_002124 si:dkey-181c13.1 coding downstream 462736 23502026 ~ 23505767 (+)
XLOC_002111 AL807389.1 non-coding upstream 186925 22847272 ~ 22847404 (+)
XLOC_002110 NA non-coding upstream 195848 22834311 ~ 22838481 (+)
XLOC_002106 NA non-coding upstream 413038 22620330 ~ 22621291 (+)
XLOC_002128 NA non-coding downstream 503327 23542617 ~ 23544066 (+)
XLOC_002131 NA non-coding downstream 549385 23588675 ~ 23591058 (+)
XLOC_002132 NA non-coding downstream 944017 23983307 ~ 23992917 (+)
XLOC_002134 NA non-coding downstream 1056949 24096239 ~ 24096470 (+)

Expression


Co-expression Network