XLOC_002122 (CT827808.1)


Basic Information

Item Value
gene id XLOC_002122
gene name CT827808.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 23417833 ~ 23417947 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004117
GCCTTCAGCTATCCCTCTGCAACTCTCAAATGGTTGCCAGCTGAAGCTAAACAGGGCCACGCCCGGTcattacctggatgggagaccacataggaaagctaggttgctgtgggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113307

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004117 True 115 rRNA 0.54 1 23417833 23417947

Neighbor

gene id symbol gene type direction distance location
XLOC_002121 LTN1 coding upstream 201954 23099365 ~ 23215879 (+)
XLOC_002120 slc25a1a coding upstream 348510 23060391 ~ 23069323 (+)
XLOC_002119 NA coding upstream 378543 23034329 ~ 23039290 (+)
XLOC_002118 si:dkey-175g6.2 coding upstream 391304 23022263 ~ 23026529 (+)
XLOC_002117 NA coding upstream 452407 22960289 ~ 22965426 (+)
XLOC_002123 si:ch73-122g19.1 coding downstream 23541 23441488 ~ 23443074 (+)
XLOC_002124 si:dkey-181c13.1 coding downstream 84079 23502026 ~ 23505767 (+)
XLOC_002125 zmp:0000000924 coding downstream 93869 23511816 ~ 23519898 (+)
XLOC_002126 zmp:0000000937 coding downstream 103005 23520952 ~ 23523315 (+)
XLOC_002127 CR847844.1 coding downstream 119629 23537576 ~ 23541888 (+)
XLOC_002116 FP102052.2 non-coding upstream 461463 22938231 ~ 22956370 (+)
XLOC_002111 AL807389.1 non-coding upstream 570429 22847272 ~ 22847404 (+)
XLOC_002110 NA non-coding upstream 579352 22834311 ~ 22838481 (+)
XLOC_002128 NA non-coding downstream 124670 23542617 ~ 23544066 (+)
XLOC_002131 NA non-coding downstream 170728 23588675 ~ 23591058 (+)
XLOC_002132 NA non-coding downstream 565360 23983307 ~ 23992917 (+)
XLOC_002134 NA non-coding downstream 678292 24096239 ~ 24096470 (+)
XLOC_002135 NA non-coding downstream 679108 24097055 ~ 24097310 (+)

Expression


Co-expression Network