XLOC_021194


Basic Information

Item Value
gene id XLOC_021194
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 25498134 ~ 25533990 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042419
TGTTAGGGTTATGGTTGGGTTAGGGTTATGGTTGGGTTAGGGTTTGGTTAGGGTTGGGTTATGGTTGGGTTATGGGTtaagtaaggtttttttttttgctttgtgtttggTTTATTTAGTTTCTCCTCTTTCTTCTTCTCTGTCACTGTTGTGTGATCACTGCAGATTGTTATTTAAGAGCGATTGTTAATTATTATACACTTCTCTGTCCTCGCCTGTGCGCATTGGCCGTCATTTGAGTGACGTCAGCTTTTCTCCTCGCCTGATTGGCTGGAGAAGGAAGCTGTCAATCTAGAGCTAATAGGCCAATAGGGAGGCTTCAGCCGGCCCTCATTTGCACGCAGCTCTGACAGCGACACTCGCAGGAGGAAGTGCACAATGTGGGAAGCAGAAGCGGAAAACAGCATCATGTCAGAAAACAATGGAAGTATGAATTCCTGATGATCTGATTTGGTCACTGACCACATGTGTGCTGCTCTTCCTATCATTTCTGTGAAATTGAGACTGTACGCAGAGCGGCCTGCGAACCCCATGGAGTGTGTTGAAGCTGTTTTCTGATCAAACTGTAAACTATTGTCTTCAATAAATTGTATCTCTGACTCCTGCTCTTTGTTCATCACACCGGCTCCTTGCATTAACA

Function

GO:

id name namespace
GO:0042719 mitochondrial intermembrane space protein transporter complex cellular_component
GO:0044424 obsolete intracellular part cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042419 True 640 lncRNA 0.45 2 25498134 25533990

Neighbor

gene id symbol gene type direction distance location
XLOC_021191 CR769772.3 coding downstream 62586 25432849 ~ 25435548 (-)
XLOC_021190 si:ch73-189n23.1 coding downstream 81002 25415980 ~ 25417132 (-)
XLOC_021189 NA coding downstream 95696 25400742 ~ 25402438 (-)
XLOC_021188 NA coding downstream 137564 25360118 ~ 25360570 (-)
XLOC_021187 NA coding downstream 153486 25341743 ~ 25344648 (-)
XLOC_021196 CR769772.2 coding upstream 6955 25540945 ~ 25543199 (-)
XLOC_021197 NA coding upstream 72025 25606015 ~ 25613341 (-)
XLOC_021198 si:ch211-12h2.8 coding upstream 77425 25611415 ~ 25612680 (-)
XLOC_021199 NA coding upstream 201191 25735181 ~ 25743791 (-)
XLOC_021200 AL845363.1 coding upstream 272451 25806441 ~ 25806557 (-)
XLOC_021186 NA non-coding downstream 362899 25134050 ~ 25135235 (-)
XLOC_021210 NA non-coding upstream 825572 26359562 ~ 26369942 (-)

Expression


Co-expression Network