XLOC_021191 (CR769772.3)


Basic Information

Item Value
gene id XLOC_021191
gene name CR769772.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 25432849 ~ 25435548 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041605
AGTCATTGACAAGGACATCGTCATGGACCGGTGGTGAAGAGCCTCGAGAGTGAAGGTAAATTTTTTGAAAAGAGAAGTCCACTATTTCAGCTTCATAATTCAGcctggaaactgaacTGCACCATAAAACTTGTGCTTGAAAAGTTTCATGGGACCCATATTAAGTTTCCAAATTTGATCTGCTGGACACAAGTAGCTTTGAAGAAGAAGGATCCCAGCTTAAAGAAAAAcatgtgtcacatccataaatGTTTGACATCATCTTCAAGCACACCTGGATTCCTTGTTGCAATGTcttcaaaacaaatgtaaaaatgaaaggaTTTCAGTGGTGAGCTCATAATGATGGGATCAAAAGGAAGTGAACTGGACTCTGAGGGACTTAACAGAAGATTGTGATGGACATGGAATGTGACACCGTTTACGaataagtcaagaaccaaatgaaACGCACTATTTTCCAGAGTACAGATTATGGAGGGGTCTGCAAAACTAATAGAGCAGTTTCTTCTTATTGGAATGCCACAGCTTAAATCCAAAGGTCCTAACAGCTCTCCTGATTCCGTCAAGGCTTGAAGTGTCAGCATTACGATGACCAActctcactcactatccttctgcTCCCTCATTTATCAGAGGCACCACAGTAGACTGAATTAGCAATTACTCTTCACTTtatagccgcaacccagcactgggaaacacccatacactctctcatacacctgcacacattcactcactgtggccaattcaccaataccgtacgcatgcctttggactgtgggggcaactggagcacccagaggaaacccacacaaacactgggagaacttgcaaacttcacacagaaacacca
>TCONS_00041606
AGAGCCTCGAGAGTGAAGGTAAATTTTTTGAAAAGAGAAGTCCACTATTTCAGCTTCATAATTCAGcctggaaactgaacTGCACCATAAAACTTGTGCTTGGTATGTATCATTGTTTTAAAATCCAAACAAAATGTATTGATCCCAGCTTAAAGAAAAAcatgtgtcacatccataaatGTTTGACATCATCTTCAAGCACACCTGGATTCCTTGTTGCAATGTcttcaaaacaaatgtaaaaatgaaaggaTTTCAGTGGTGAGCTCATAATGATGGGATCAAAAGGAAGTGAACTGGACTCTGAGGGACTTAACAGAAGATTGTGATGGACATGGAATGTGACACCGTTTACGaataagtcaagaaccaaatgaaACGCACTATTTTCCAGAGTACAGATTATGGAGGGGTCTGCAAAACTAATAGAGCAGTTTCTTCTTATTGGAATGCCACAGCTTgatgctgcatataagGACTCCGTGAAGAACACAGAAACATCTTTAAAAGAAATGGCCCAAAAGaagggaaggaaagaaggaagtacTCAGCGttgaaatattgttttacagAAATCCAAAGGTCCTAACAGCTCTCCTGATTCCGTCAAGGCTTGAAGTGTCAGCATTACGATGACCAActctcactcactatccttctgcTCCCTCATTTATCAGAGGCACCACAGTAGACTGAATTAGCAATTACTCTTCACTTtatagccgcaacccagcactgggaaacacccatacactctctcatacacctgcacacattcactcactgtggccaattcaccaataccgtacgcatgcctttggactgt
>TCONS_00041607
AGTCATTGACAAGGACATCGTCATGGACCGGTGGTGAAGAGCCTCGAGAGTGAAGGTAAATTTTTTGAAAAGAGAAGTCCACTATTTCAGCTTCATAATTCAGcctggaaactgaacTGCACCATAAAACTTGTGCTTGAAAAGTTTCATGGGACCCATATTAAGTTTCCAAATTTGATCTGCTGGACACAAGTAGCTTTGAAGAAGAAGGATCCCAGCTTAAAGAAAAAcatgtgtcacatccataaatGTTTGACATCATCTTCAAGCACACCTGGATTCCTTGTTGCAATGTcttcaaaacaaatgtaaaaatgaaaggaTTTCAGTGGTGAGCTCATAATGATGGGATCAAAAGGAAGTGAACTGGACTCTGAGGGACTTAACAGAAGGTAAGttcatttcaatacattttatgtcaagattaattctgtgatttaaattcatatttacacaCTCTACAAATGCTGTCTTTCTACCTCAAATTGTGATGGACATGGAATGTGACACCGTTTACGaataagtcaagaaccaaatgaaACGCACTATTTTCCAGAGTACAGATTAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095230

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041605 False 859 processed_transcript 0.43 6 25432849 25435548
TCONS_00041606 False 826 processed_transcript 0.41 6 25432923 25435511
TCONS_00041607 True 568 processed_transcript 0.37 4 25433780 25435548

Neighbor

gene id symbol gene type direction distance location
XLOC_021190 si:ch73-189n23.1 coding downstream 15717 25415980 ~ 25417132 (-)
XLOC_021189 NA coding downstream 30411 25400742 ~ 25402438 (-)
XLOC_021188 NA coding downstream 72279 25360118 ~ 25360570 (-)
XLOC_021187 NA coding downstream 88201 25341743 ~ 25344648 (-)
XLOC_021186 NA coding downstream 297614 25134050 ~ 25135235 (-)
XLOC_021192 CR769772.4 coding upstream 29332 25464880 ~ 25502977 (-)
XLOC_021193 CR769772.1 coding upstream 37752 25473300 ~ 25546076 (-)
XLOC_021194 NA coding upstream 62586 25498134 ~ 25533990 (-)
XLOC_021195 NA coding upstream 70008 25505556 ~ 25506143 (-)
XLOC_021196 CR769772.2 coding upstream 105397 25540945 ~ 25543199 (-)
XLOC_021184 BX294165.1 non-coding downstream 383644 25045692 ~ 25049205 (-)
XLOC_021197 NA non-coding upstream 170467 25606015 ~ 25613341 (-)

Expression


Co-expression Network