XLOC_021526 (uckl1b)


Basic Information

Item Value
gene id XLOC_021526
gene name uckl1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 13528053 ~ 13600004 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042767
gccttgcctcatattatattattattaatattcattcattcattttcattcattttcttgtcagcttagtcccttcattaatctgaggtcgccacagcggaatgaaccgccaacttgtccaccaagtttttacgcagcagatgcccttccagccgcaaaccatctctggaaaacatctacacacacattcactcataaaCTCATAGCAGCATTGCTGaataaaattatttcatttaacaaGTATAAAAGTATAATTTAACACCAgatagtttctttttttatttctcgaAACCTAAATTAGGACCATGTTTTGGTGTGTTGTATCATAGTTGGCATGAATTACTTACCTACACCAGCGACTACCATGTGGTAACGTTACATAATACTGTACAGTGCCTAAAACTGTACCTACAAATATACATTACAATTTCCAttctgggatttgtagttccACTCTGACGGACAAAAGTGAGGTCATATGAAACATAAAACTACACATCCCAGCAGCATTAGCCTGGCCTAAAGTCGCAACAGCTGATTGTCAAATAGGAAACTAACAATGTCTGCCGTGTGCGGAGACGGAAGAGATTCAGCGATGGAGTGTGGAGAAAAATCATCTGCTCGGTGCACAAGTGGTGGTGCTGAAGACTCTCTGGACAGACTCCTCCCCACTGTCAACACTAGCCTGTCACCTCGGAAACGAACCACCAGTCAATGCAAATCAGAGCCTCCTCTGCTCCGGACCAGTAAGAGAACCATCTACACAGCCGGACGGCCACCATGGTACAATGAGCACGGGACGCAGTCCAAAGAAGCGTTTGTCATTGGTTCGTATATCACAGAAAAACCCATACAGCAATCGCTATTTTACAATTTACCTCAGTTTACGTCTCTGTTTTTACTCATAGGACTTTGCGGAGGCAGTGCCTCAGGGAAAACAACAGTCGCTCGTAAAATTATTGAGGCTTTGGATGTCCCTTGGGTGGTTCTTCTGTCAATGGATTCCTTCTATAAGGTTCTGACGTCTGAACAGCAGCTGCAGGCCGCTAGTAACGATTACAACTTTGACCATCCAGACGCCTTTGATTTCGTCCTGCTGGTTCACACGCTCCGCAAACTCAAGCAGGGCAAGAGCGTCAAGATCCCAGTGTACGACTTCACCACACACGGACGCCAGAAAGAATGGaaaACAGTGTATGGTGCAAGTGTTATCATCTTCGAGGGCATCATGTCATTTGCGGATAAAGAGCTGCTGAAGCTGCTGGACATGAAGATCTTTGTGGACACTGATTCTGACATCCGGCTGGTACGGAGGCTCAGGAGGGACATCACAGAGCGTGGACGGGACATCGAGGGAGTCATCAAACAGTATAACAAATTTGTCAAGCCGGCTTTTGAACAGTACATTGAGCCAACCATGAGACTGGCAGATATTGTGGTGCCAAGGGGGGGTGGAAACATGGTGGCCATTGACCTGATAGTGCAGCATGTACACAGTCAGCTGGAGGAGCGAGAGCTCAGCGTCAGGGCGGCGCTGGCATCTGCTCATCAGGCACAGCCGCTACCACAGACTCTGAGTGTTCTGGAAAGCACACCGCAGGTCCGCGGCATGCACACCATCATCAGAAATAAAGACACCAATCGAGACGAGTTCATCTTCTACTCCAAGAGGTTAATGCGGCTCCTCATCGAGAGAGCGCTGTCCTTCCTTCCATCTCAGGTCCACATTGTTCAGACCCCACAAGGAGAGGATTATGAGGGCAGAATCTTTCATGGAAAGAGGattacGGGCGTGTCGATTCTAAGGGCGGGAGAAACCATGGAGCCTGCGCTTAGAGCCGTGTGCAAAGACGTCCGCATTGGCAAAATCCTCATCCAGACCAATCAGGACACAGGAGAGCCTGAGTTACACTACTTGCGTCTACCCAAAGACATCAGCGAGGATCATGTGATTCTGATGGACTGCACTGTGTCCACTGGAGCGGCAGCCATGATGGCCATCAGAGTTTTACTAgaTCATGATGTTCAGGAGGAAAAGATCCTGTTGGTGTCTCTGCTGATGGCCGAGATGGGTGTTCATTCAGTGGCCTACGCTTTCCCTCAGGTCAAAATCATCACCACCGCCGTCGACAAGAAGGTCAATGACCTCTTCCACATCATCCCCGGCATAGGAAATTTTGGCGACCGTTACTTTGGCACGGACGCTCCTACAGACTGGAGCGATGATGACATGGACGAGCCGAGCTGCTGAGAGActaacatttgtacattttatccaaaaacaatatttttatacattttttgcacttcccaaatggaaaaaaagagtgtttttatttgtgaCCTTTTTATTTATGAACGCTTATTTAATGCTATATTTAACATGTACAACTGAAGCACATGCAGTTGCATCATTGCCTTACGTGTTTTTTGCTACGGTTGTAGTACTTTAGCCATATGAACACAACATGCTTGTTGCTTTCATTATTTTCTCTACTCAGTTTCATGCAGCAGAGCTTTTCAGAGGGTAAAATAAGCCTCAAAGTGCTGCTGTGCTACACTTAGACCGTGAAAATTCTTTGAAGGACCACTTCGTCGGAAAAAACACGTGGGCGTTGCTTTTGTTTTAATCTTTTGCTTTCTCGCTTTACCTGCAGACGAATGCTGACCAAACCACAGACTGCTCACAAATACACTTTCACAACACAGTACCACCACTCTATGCAATGACTGCGCTATAAAACCCTCAAATATTGAGCTTTTCTTCATTGATTAATAAATCAAACATATAAGCTTGAGTCAACAGCTTTCTGTCAAACGCGGAAATGATCACAACTCCATTTAAAAGAAAAGCACATTCTGTAAGATTGACCGACCTGCTTTTGTTGAAGCCACAAAGACAGTTATATTTTTATCTGGCCATTGAGTTCATAGCTGGCTTTACCATATATGGCTCTGTCATCTCAATGTTCATACAAAACGTCACTAGATCAAAACTAGCCCACAGGAAGCGCTGGTGTTTGGCCTGAAGTTCAGCCCCCCGAAACCTCTTAGTGTATTGTCAGTGTCtcggttttattatttttaccccGCTGAGCACTCTGACTGATTAATTCATCGCTGTGAAACTTGATGTGTATGTGTTGTTTGTTTGAATGACGCTGAtttgaaatgtgtgtatatttgtaaaCTATGAAAATGGCATGTTTTTTTAATGCTCGGCAAGGCCTATTGAATGTATCCACTGTGATGTTTTGTTGAACAACGGGAATAAAAATCATACGTTTATGGATGTTTATTTGATCATAATGAGTGCGTTTACATGATGAAGCCGAATAACCACTAGATTTTTCTTTCTCTTGTGTTGATTTTACCCAGTGTGCCCTCTTGAAAAAATACTAAAGTCATTTGTAGTAAATACTACagtcagggcttaatttgtgctggaaaacacacctgatccgaaacctctgaaatctgatacAGCACCTACTCTTACACCTCCACACCCCCCGGCCCATCACTTTTGTACGCAACAAGCCTTCGCCATCATCACACCACAACCCACAAAATATACtgcaaaatgtgtaaaataaataaaaaacttacgtaaataattaattaaaaaaatatgcagtAAAAGTGGTACAATCTAAATCAAAACGTAAGTggtacaataaaaaaaagctatTCGGTTTTTCAGGTTTTAGTGATGTATTACAACCGACTAAATTAGAAACGcaaattataacattttatactatttttattaatagtCTTGTATGGTCaagttatttgtttttacatgtcAATGGTATGTTCTTCATGTCAGTATCCTAATCGATttgttaaagttttatttatcataatgatgatatatatatttatttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatcgacaCCTTGGAATTATgtttctatctgcattctaaCTGATTTTGAGATATAGagtttcaaagtttttgcattccataaagcaaacagtatgtgtgtaacatttgttttttttaaataaaaaggaaacaacttataaaaaacaacccataatatatatatatgtagccaatcgtgtgtgtgcgcgc
>TCONS_00042768
ATCCCAGCAGCATTAGCCTGGCCTAAAGTCGCAACAGCTGATTGTCAAATAGGAAACTAACAATGTCTGCCGTGTGCGGAGACGGAAGAGATTCAGCGATGGAGTGTGGAGAAAAATCATCTGCTCGGTGCACAAGTGGTGGTGCTGAAGACTCTCTGGACAGACTCCTCCCCACTGTCAACACTAGCCTGTCACCTCGGAAACGAACCACCAGTCAATGCAAATCAGAGCCTCCTCTGCTCCGGACCAGTAAGAGAACCATCTACACAGCCGGACGGCCACCATGGTACAATGAGCACGGGACGCAGTCCAAAGAAGCGTTTGTCATTGGACTTTGCGGAGGCAGTGCCTCAGGGAAAACAACAGTCGCTCGTAAAATTATTGAGGCTTTGGATGTCCCTTGGGTGGTTCTTCTGTCAATGGATTCCTTCTATAAGGTTCTGACGTCTGAACAGCAGCTGCAGGCCGCTAGTAACGATTACAACTTTGACCATCCAGACGCCTTTGATTTCGTCCTGCTGGTTCACACGCTCCGCAAACTCAAGCAGGGCAAGAGCGTCAAGATCCCAGTGTACGACTTCACCACACACGGACGCCAGAAAGAATGGaaaACAGTGTATGGTGCAAGTGTTATCATCTTCGAGGGCATCATGTCATTTGCGGATAAAGAGCTGCTGAAGCTGCTGGACATGAAGATCTTTGTGGACACTGATTCTGACATCCGGCTGGTACGGAGGCTCAGGAGGGACATCACAGAGCGTGGACGGGACATCGAGGGAGTCATCAAACAGTATAACAAATTTGTCAAGCCGGCTTTTGAACAGTACATTGAGCCAACCATGAGACTGGCAGATATTGTGGTGCCAAGGGGGGGTGGAAACATGGTGGCCATTGACCTGATAGTGCAGCATGTACACAGTCAGCTGGAGGAGCGAGAGCTCAGCGTCAGGGCGGCGCTGGCATCTGCTCATCAGGCACAGCCGCTACCACAGACTCTGAGTGTTCTGGAAAGCACACCGCAGGTCCGCGGCATGCACACCATCATCAGAAATAAAGACACCAATCGAGACGAGTTCATCTTCTACTCCAAGAGGTTAATGCGGCTCCTCATCGAGAGAGCGCTGTCCTTCCTTCCATCTCAGGTCCACATTGTTCAGACCCCACAAGGAGAGGATTATGAGGGCAGAATCTTTCATGGAAAGAGGattacGGGCGTGTCGATTCTAAGGGCGGGAGAAACCATGGAGCCTGCGCTTAGAGCCGTGTGCAAAGACGTCCGCATTGGCAAAATCCTCATCCAGACCAATCAGGACACAGGAGAGCCTGAGTTACACTACTTGCGTCTACCCAAAGACATCAGCGAGGATCATGTGATTCTGATGGACTGCACTGTGTCCACTGGAGCGGCAGCCATGATGGCCATCAGAGTTTTACTAgaTCATGATGTTCAGGAGGAAAAGATCCTGTTGGTGTCTCTGCTGATGGCCGAGATGGGTGTTCATTCAGTGGCCTACGCTTTCCCTCAGGTCAAAATCATCACCACCGCCGTCGACAAGAAGGTCAATGACCTCTTCCACATCATCCCCGGCATAGGAAATTTTGGCGACCGTTACTTTGGCACGGACGCTCCTACAGACTGGAGCGATGATGACATGGACGAGCCGAGCTGCTGAGAGActaacatttgtacattttatccaaaaacaatatttttatacattttttgcacttcccaaatggaaaaaaagagtgtttttatttgtgaCCTTTTTATTTATGAACGCTTATTTAATGCTATATTTAACATGTACAACTGAAGCACATGCAGTTGCATCATTGCCTTACGTGTTTTTTGCTACGGTTGTAGTACTTTAGCCATATGAACACAACATGCTTGTTGCTTTCATTATTTTCTCTACTCAGTTTCATGCAGCAGAGCTTTTCAGAGGGTAAAATAAGCCTCAAAGTGCTGCTGTGCTACACTTAGACCGTGAAAATTCTTTGAAGGACCACTTCGTCGGAAAAAACACGTGGGCGTTGCTTTTGTTTTAATCTTTTGCTTTCTCGCTTTACCTGCAGACGAATGCTGACCAAACCACAGACTGCTCACAAATACACTTTCACAACACAGTACCACCACTCTATGCAATGACTGCGCTATAAAACCCTCAAATATTGAGCTTTTCTTCATTGATTAATAAATCAAACATATAAGCTTGAGTCAACAGCTTTCTGTCAAACGCGGAAATGATCACAACTCCATTTAAAAGAAAAGCACATTCTGTAAGATTGACCGACCTGCTTTTGTTGAAGCCACAAAGACAGTTATATTTTTATCTGGCCATTGAGTTCATAGCTGGCTTTACCATATATGGCTCTGTCATCTCAATGTTCATACAAAACGTCACTAGATCAAAACTAGCCCACAGGAAGCGCTGGTGTTTGGCCTGAAGTTCAGCCCCCCGAAACCTCTTAGTGTATTGTCAGTGTCtcggttttattatttttaccccGCTGAGCACTCTGACTGATTAATTCATCGCTGTGAAACTTGATGTGTATGTGTTGTTTGTTTGAATGACGCTGAtttgaaatgtgtgtatatttgtaaaCTATGAAAATGGCATGTTTTTTTAATGCTCGGCAAGGCCTATTGAATGTATCCACTGTGATGTTTTGTTGAACAACGGGAATAAAAATCATACGTTTATGGATGTTTA
>TCONS_00042769
TCATGTTAGCCAGAGACTCCAGGGTTCGTCTTGAATGGTGACGGAGAAACCACAACAAATCAGACGTACTGTAGAAAGCACACTTTTGTTTTCCTCCCCTTTGCGTCAGTTTCGTTTTACTTCCTCTCCTCGGCTTGCCAGAGGGCAGGCACCACACTGTGTGCCTGCGCATGTGTTTTGTCCCAGCGCTTATTAGTGCTGATCTTTCTTTGGAGCTTTCATAAGACTGTTTGGTCATGAATACACTCCCAGCGTTTTCGGGAGCCAGAATATCAGGCTGCTGGGCTCTCAGGGCTGATGGAAGTGGTGGTGCTGAAGACTCTCTGGACAGACTCCTCCCCACTGTCAACACTAGCCTGTCACCTCGGAAACGAACCACCAGTCAATGCAAATCAGAGCCTCCTCTGCTCCGGACCAGTAAGAGAACCATCTACACAGCCGGACGGCCACCATGGTACAATGAGCACGGGACGCAGTCCAAAGAAGCGTTTGTCATTGGACTTTGCGGAGGCAGTGCCTCAGGGAAAACAACAGTCGCTCGTAAAATTATTGAGGCTTTGGATGTCCCTTGGGTGGTTCTTCTGTCAATGGATTCCTTCTATAAGGTTCTGACGTCTGAACAGCAGCTGCAGGCCGCTAGTAACGATTACAACTTTGACCATCCAGACGCCTTTGATTTCGTCCTGCTGGTTCACACGCTCCGCAAACTCAAGCAGGGCAAGAGCGTCAAGATCCCAGTGTACGACTTCACCACACACGGACGCCAGAAAGAATGGaaaACAGTGTATGGTGCAA

Function

symbol description
uckl1b Predicted to enable ATP binding activity and uridine kinase activity. Predicted to be involved in CTP salvage and UMP salvage. Predicted to act upstream of or within nucleoside metabolic process and phosphorylation. Predicted to be active in cytoplasm. Orthologous to human UCKL1 (uridine-cytidine kinase 1 like 1).

GO:

id name namespace
GO:0044206 UMP salvage biological_process
GO:0044211 CTP salvage biological_process
GO:0009116 nucleoside metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004849 uridine kinase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090311-45 Predicted to enable ATP binding activity and uridine kinase activity. Predicted to be involved in CTP salvage and UMP salvage. Predicted to act upstream of or within nucleoside metabolic process and phosphorylation. Predicted to be active in cytoplasm. Orthologous to human UCKL1 (uridine-cytidine kinase 1 like 1).

Ensembl:

ensembl_id ENSDARG00000078973

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042767 False 4146 mRNA 0.41 14 13528053 13600004
TCONS_00042768 False 2720 mRNA 0.46 15 13528550 13599156
TCONS_00042769 True 795 mRNA 0.51 5 13533885 13566943

Neighbor

gene id symbol gene type direction distance location
XLOC_021524 ZNF512B coding upstream 11201 13375359 ~ 13516852 (+)
XLOC_021525 CR749171.1 coding upstream 85331 13442608 ~ 13442722 (+)
XLOC_021523 samd10b coding upstream 195190 13124085 ~ 13332863 (+)
XLOC_021522 si:dkey-150i13.2 coding upstream 593182 12916059 ~ 12934871 (+)
XLOC_021521 smc1al coding upstream 630238 12840080 ~ 12897815 (+)
XLOC_021527 dre-mir-1388 coding downstream 4214 13604218 ~ 13604320 (+)
XLOC_021528 NA coding downstream 24909 13624913 ~ 13625531 (+)
XLOC_021529 NA coding downstream 56031 13656035 ~ 13656319 (+)
XLOC_021530 zbtb46 coding downstream 121822 13721826 ~ 13806495 (+)
XLOC_021531 lmod3 coding downstream 214974 13814978 ~ 13822642 (+)
XLOC_021518 NA non-coding upstream 697787 12673403 ~ 12830266 (+)
XLOC_021520 NA non-coding upstream 827639 12698971 ~ 12700414 (+)
XLOC_021519 NA non-coding upstream 852632 12674927 ~ 12675421 (+)
XLOC_021514 NA non-coding upstream 1249005 12259536 ~ 12279048 (+)
XLOC_021532 NA non-coding downstream 244553 13844557 ~ 13850492 (+)
XLOC_021533 NA non-coding downstream 328335 13928339 ~ 13941278 (+)

Expression


Co-expression Network