G213408


Basic Information

Item Value
gene id G213408
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102167620 ~ 102168049 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242384
GCCTTTTATATACCAATTCCAACtcctctcttggcatgtccagcccactcattatctcagccaattgtggctagtgggaaggttgctgtgTTTTTCAGTGGCTTATCCAACAAGGCtggtaatttaacaattttatttgtatttacagatggcatacaagtttgttattaaggcacatgaaagttcacattttccagaagacatttctgccaaaaaacgcatttggataaaaaatataaaaaataaaaagtaaaaatggctctcctgtgaagtcgtgacttgcctagtttcctgaaacgagtcacaaataTCTGATGACTGAAGGAGTGGGAAGATTTTTATGTGATAATttgtattatatacagtatatatactgtatatatttttttaattcatgTAATTTTTTGCCCCTTCCTGTAATGGAATTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242384 True 430 lncRNA 0.34 1 102167620 102168049

Neighbor

gene id symbol gene type direction distance location
LOC110501416 LOC106561859 coding downstream 167533 101997799 ~ 102000087 (-)
LOC110501407 LOC106561868 coding downstream 251177 101912984 ~ 101916443 (-)
LOC110517830 LOC105018063 coding downstream 421073 101743015 ~ 101746551 (-)
LOC118944015 NA coding downstream 460973 101706005 ~ 101706647 (-)
LOC118944014 NA coding downstream 463660 101701386 ~ 101703960 (-)
commd4 comd4 coding upstream 119846 102287895 ~ 102292356 (-)
LOC110501505 LOC106561846 coding upstream 258008 102426057 ~ 102444259 (-)
hexa hexa coding upstream 340443 102508492 ~ 102560986 (-)
c2h15orf39 LOC106561847 coding upstream 407250 102575299 ~ 102614406 (-)
trnaq-cug NA coding upstream 567231 102735280 ~ 102735351 (-)
G213403 NA non-coding downstream 857 102165713 ~ 102166763 (-)
G213266 NA non-coding downstream 19978 102132896 ~ 102147642 (-)
G213389 NA non-coding downstream 49487 102117568 ~ 102118133 (-)
G213291 NA non-coding downstream 217940 101947531 ~ 101949680 (-)
G213285 NA non-coding downstream 238418 101921527 ~ 101929202 (-)
G213409 NA non-coding upstream 136 102168185 ~ 102168594 (-)
G213410 NA non-coding upstream 572 102168621 ~ 102168920 (-)
G213411 NA non-coding upstream 2136 102170185 ~ 102170944 (-)
G213418 NA non-coding upstream 12983 102181032 ~ 102181249 (-)
G213425 NA non-coding upstream 17894 102185943 ~ 102186958 (-)
G212836 NA other downstream 447888 101719367 ~ 101719732 (-)
G212829 LOC106613263 other downstream 454773 101712238 ~ 101712847 (-)
LOC110502631 LOC106592148 other downstream 987859 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 1453367 100662972 ~ 100716213 (-)
G213475 NA other upstream 218080 102386129 ~ 102531578 (-)
G214030 NA other upstream 651319 102819368 ~ 102819829 (-)
G214038 NA other upstream 675972 102844021 ~ 102847527 (-)
G214041 NA other upstream 695358 102863407 ~ 102863771 (-)
G214126 NA other upstream 953600 103121649 ~ 103122969 (-)

Expression


Co-expression Network