G213982


Basic Information

Item Value
gene id G213982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102782410 ~ 102784816 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU243095
ATGactttacttcctgaattgaaatggccCTAACTGTGGAAGCCAGAGGGCCAAAATAACTGCATATGTCTATTTAACAGAGCATGAAAACATGCATGGCTGGGCCATCCCAAATGGCCAGCgagggcccatagtgctctggtcaaaagtagtgcactatatagggaatatggtgcaatagggctctggtcaaaagtagtgcactatataggaaatagggtgcaatagggctctggtctaaagtagtcactatatagggaatagggtgcaatagggctctggtctaaagtagtgcactatatagggaatagggtgcaatggggctctggtctaaagtagtgcactatatagggaatagggttccattcaggacagtgaggggaggctgcAGGAGTCTGTAATGTGACCGTGATATCgacagtgaggggaggctgcAGGAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGGAGTCTAATGTGACCGTGATAACgacagtgaggggaggctgcAGGAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAATGACATTGAGGAGAGGCTGCAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAATGACATTGAGGAGAGGCTGCAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCATGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAACGACAGTGAGGGGAATGCTGCAGGAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAATGACATTGAGGAGAGGCTGCAGGAGTCTGTAATGTGATGTGACCATGATAACgacagtgaggggaggctgcAGGAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGGAGTCTGTAATGTGACCATGATAACGACAGTGAGGGCAGGCTGCAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAATGTGATGTGACCATGATAACGACAGTGAGGAGAGGCTGCAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTATAATGTGACCGTGATAACGACAGTGAGGGAAGGCTGCAGTAGTCTGTAATATGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAACGACAGTGAGGGCAGGCTGCAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTGATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTGATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAATGTGATGTGACCATGATAACGACAGTGAGGAGAGGCTGCAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTATAATGTGACCGTGATAACGACAGTGAGGGAAGGCTGCAGTAGTCTGTAATATGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTACTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGGAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGATGTGACCATGATAACGACAGTGAGGGTTAGGCTGCAGGAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTTGTCTGTAATGTGACCGTGATAACGACAGTGAGGGTTAGGCTGCAGGAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAACgacagtgaggggaggctgcAGGAGTCTAATGTAATGTGACCATGATAACgacagtgaggggaggctgcAGTAGTCTGTAATGTGACCGTGATAATGACAGTGTGGGGAGGCTGCAGGAGTCTGTAATGTGACCGTGATAACTGCAGCACTACACGTAATAAGGATTCTCTAAATAAAGAACTTAATGCCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU243095 True 2407 lncRNA 0.50 1 102782410 102784816

Neighbor

gene id symbol gene type direction distance location
LOC110501471 rl4a coding downstream 4481 102771145 ~ 102777929 (-)
LOC118944161 NA coding downstream 5032 102777280 ~ 102777378 (-)
LOC118944155 NA coding downstream 5503 102776839 ~ 102776907 (-)
LOC118944164 NA coding downstream 5999 102776313 ~ 102776411 (-)
LOC118944153 NA coding downstream 7431 102774912 ~ 102774979 (-)
LOC110501464 snapc5 coding upstream 3468 102788284 ~ 102797795 (-)
LOC110501401 LOC106561857 coding upstream 349524 103134340 ~ 103141737 (-)
kif23 kif23 coding upstream 397570 103182386 ~ 103223236 (-)
LOC110501379 LOC106561844 coding upstream 442016 103226832 ~ 103229829 (-)
ighmbp2 ighmbp2 coding upstream 498377 103283193 ~ 103317354 (-)
G214020 NA non-coding downstream 12809 102769109 ~ 102769601 (-)
G214019 NA non-coding downstream 15524 102766530 ~ 102766886 (-)
G214018 NA non-coding downstream 16257 102765889 ~ 102766153 (-)
G214017 NA non-coding downstream 21330 102760876 ~ 102761080 (-)
G214014 NA non-coding downstream 25885 102749682 ~ 102756525 (-)
G214029 NA non-coding upstream 24824 102809640 ~ 102809857 (-)
G214042 NA non-coding upstream 79020 102863836 ~ 102864122 (-)
G214055 NA non-coding upstream 115131 102899947 ~ 102900699 (-)
G214057 LOC106613263 non-coding upstream 118233 102903049 ~ 102903389 (-)
G214074 NA non-coding upstream 189995 102974811 ~ 102975961 (-)
G213475 NA other downstream 251184 102386129 ~ 102531578 (-)
LOC110517830 LOC105018063 other downstream 1035859 101743015 ~ 101746551 (-)
G212836 NA other downstream 1062678 101719367 ~ 101719732 (-)
G212829 LOC106613263 other downstream 1069563 101712238 ~ 101712847 (-)
LOC110502631 LOC106592148 other downstream 1602649 100976119 ~ 101191014 (-)
G214030 NA other upstream 34552 102819368 ~ 102819829 (-)
G214038 NA other upstream 59205 102844021 ~ 102847527 (-)
G214041 NA other upstream 78591 102863407 ~ 102863771 (-)
G214126 NA other upstream 336833 103121649 ~ 103122969 (-)
G214137 NA other upstream 371694 103156510 ~ 103157854 (-)

Expression


Co-expression Network