G214057 (LOC106613263)


Basic Information

Item Value
gene id G214057
gene name LOC106613263
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102903049 ~ 102903389 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU243258
gtttgctgtgtctgtcagtgtagtgtccagagcatggaggcgctaccaggagacaggccagtacatcaggagacatggagaaggccgtaggagggcaacaaccctgcagcaggaccgctacctccacctttgtgcaaggaggagcaggaggagcactgccagagccctgcaaaattacctccagcaggccacaaatgtgcatgtgtctgctcaaacggtcaaaaacagattccatgagggtggtatgagggcccgacgtccacaggtgggggttgtgcttacagcccaacaccgtgcaggacgtttggcatttgccagagaacaccaagattgtcaaattc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109523355 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243258 True 341 lncRNA 0.50 1 102903049 102903389

Neighbor

gene id symbol gene type direction distance location
LOC110501464 snapc5 coding downstream 105254 102788284 ~ 102797795 (-)
LOC118944161 NA coding downstream 125671 102777280 ~ 102777378 (-)
LOC118944155 NA coding downstream 126142 102776839 ~ 102776907 (-)
LOC118944164 NA coding downstream 126638 102776313 ~ 102776411 (-)
LOC118944153 NA coding downstream 128070 102774912 ~ 102774979 (-)
LOC110501401 LOC106561857 coding upstream 230951 103134340 ~ 103141737 (-)
kif23 kif23 coding upstream 278997 103182386 ~ 103223236 (-)
LOC110501379 LOC106561844 coding upstream 323443 103226832 ~ 103229829 (-)
ighmbp2 ighmbp2 coding upstream 379804 103283193 ~ 103317354 (-)
gatd1 pddc1 coding upstream 427120 103330509 ~ 103334761 (-)
G214055 NA non-coding downstream 2350 102899947 ~ 102900699 (-)
G214042 NA non-coding downstream 38927 102863836 ~ 102864122 (-)
G214029 NA non-coding downstream 93192 102809640 ~ 102809857 (-)
G213982 NA non-coding downstream 118233 102782410 ~ 102784816 (-)
G214020 NA non-coding downstream 133448 102769109 ~ 102769601 (-)
G214074 NA non-coding upstream 71422 102974811 ~ 102975961 (-)
G214078 NA non-coding upstream 81662 102985051 ~ 102985345 (-)
G214080 NA non-coding upstream 122753 103026142 ~ 103064216 (-)
G214098 NA non-coding upstream 181139 103084528 ~ 103084758 (-)
G214099 NA non-coding upstream 181772 103085161 ~ 103085611 (-)
G214041 NA other downstream 39278 102863407 ~ 102863771 (-)
G214038 NA other downstream 55522 102844021 ~ 102847527 (-)
G214030 NA other downstream 83220 102819368 ~ 102819829 (-)
G213475 NA other downstream 371823 102386129 ~ 102531578 (-)
LOC110517830 LOC105018063 other downstream 1156498 101743015 ~ 101746551 (-)
G214126 NA other upstream 218260 103121649 ~ 103122969 (-)
G214137 NA other upstream 253121 103156510 ~ 103157854 (-)
G214207 NA other upstream 410899 103314288 ~ 103314933 (-)
tmem258 NA other upstream 439447 103342831 ~ 103345931 (-)
G214461 NA other upstream 695590 103598979 ~ 103599687 (-)

Expression


Co-expression Network