XLOC_021748 (dre-let-7h)


Basic Information

Item Value
gene id XLOC_021748
gene name dre-let-7h
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 28536665 ~ 28536778 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043159
GAGTTGGCTGTGTTGTGGTGAGGTAGTAAGTTGTGTTGTTGTTGGGGATCAGTATAGTATGGCCCTTGAAGGAGATAACTATACAATTTACTGCCTTCCATAATGCAGACTCTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081815

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043159 True 114 miRNA 0.43 1 28536665 28536778

Neighbor

gene id symbol gene type direction distance location
XLOC_021747 dre-let-7g-2 coding upstream 208 28536361 ~ 28536457 (+)
XLOC_021745 NA coding upstream 116081 28390669 ~ 28420584 (+)
XLOC_021744 zgc:153867 coding upstream 148152 28374458 ~ 28388513 (+)
XLOC_021743 birc5b coding upstream 210819 28322986 ~ 28325846 (+)
XLOC_021742 NA coding upstream 259235 28139759 ~ 28277430 (+)
XLOC_021749 l1cama coding downstream 46087 28582865 ~ 28681775 (+)
XLOC_021750 BX664745.1 coding downstream 78049 28614827 ~ 28614942 (+)
XLOC_021751 smc1a coding downstream 156500 28693278 ~ 28713982 (+)
XLOC_021752 srm coding downstream 182085 28718863 ~ 28727106 (+)
XLOC_021753 cort coding downstream 194601 28731379 ~ 28732313 (+)
XLOC_021738 NA non-coding upstream 663960 27870739 ~ 27872705 (+)
XLOC_021731 NA non-coding upstream 1020392 27508867 ~ 27516273 (+)
XLOC_021755 CR381533.1 non-coding downstream 260648 28797426 ~ 28797548 (+)
XLOC_021756 CR381533.2 non-coding downstream 263325 28800103 ~ 28800219 (+)
XLOC_021758 NA non-coding downstream 358997 28895775 ~ 28896080 (+)
XLOC_021759 CR677513.1 non-coding downstream 366552 28903330 ~ 28903456 (+)

Expression


Co-expression Network