G226314 (tryp)


Basic Information

Item Value
gene id G226314
gene name tryp
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13381106 ~ 13387143 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258863
AGCTTGCCTGGGATGCCAGATTATGTTTTGAGTCTTCATGAGCTGTTCAGTTCCCTCAAACACACGCAGGTTGTGCTCTCCAAGCATGATCTGCATTGCGTAGGGGCTTGTACCAGCAGTGAGCGACAGAGAGCACCCACTGCTCGTTGATGAGCACGGCTCCGCAGAAGTGGTACCCGTAGTTGAGGGAGGCCATCCAGGGTCGGGAGTGAGGTTCACACTCCTGGCCACCGATGATCTTACCATCCTCACGGGGCACTGCAGCAGCTCCAACCAGCAGTATCAGAGCGAGCAGTctcatggtgtctgtctgtccggtGAACACTGGTTGATCAAAGACACCTGGACACGCGCATGGACTTTAT

Function

symbol description
tryp cytosolic tryparedoxin peroxidase, trypanosomatid typical 2-Cys peroxiredoxin

NR:

description
PREDICTED: trypsin isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258863 True 365 lncRNA 0.34 3 13381106 13387143

Neighbor

gene id symbol gene type direction distance location
LOC110510120 LOC106577461 coding downstream 2347 13376855 ~ 13378759 (-)
LOC110503661 trp-i coding downstream 20144 13359882 ~ 13360962 (-)
LOC110510138 trp-ii coding downstream 33234 13346109 ~ 13347872 (-)
LOC110510146 mrpl17 coding downstream 39261 13339193 ~ 13341845 (-)
cxcr3.1 cxcr3b coding downstream 452042 12925454 ~ 12929064 (-)
LOC110510106 LOC106577440 coding upstream 1266 13388409 ~ 13410671 (-)
LOC110510167 LOC106577478 coding upstream 48453 13435596 ~ 13439420 (-)
LOC110510175 LOC106577487 coding upstream 53641 13440784 ~ 13459048 (-)
LOC110505114 NA coding upstream 76491 13463634 ~ 13474497 (-)
LOC110510190 LOC106577499 coding upstream 92976 13480119 ~ 13481941 (-)
G226206 NA non-coding downstream 38019 13342756 ~ 13343087 (-)
G226291 NA non-coding downstream 46747 13333214 ~ 13334359 (-)
G226242 NA non-coding downstream 127893 13253005 ~ 13253213 (-)
G226241 NA non-coding downstream 128230 13252587 ~ 13252876 (-)
G226240 NA non-coding downstream 129001 13251870 ~ 13252105 (-)
G226325 NA non-coding upstream 27085 13414228 ~ 13415124 (-)
G226326 NA non-coding upstream 28086 13415229 ~ 13429753 (-)
G226334 NA non-coding upstream 42663 13429806 ~ 13430023 (-)
G226335 LOC106577470 non-coding upstream 45182 13432325 ~ 13433104 (-)
G226361 NA non-coding upstream 74415 13461558 ~ 13461866 (-)
G226294 LOC100136012 other downstream 36731 13344074 ~ 13344375 (-)
G226224 NA other downstream 156591 13223884 ~ 13224515 (-)
G226187 NA other downstream 200834 13177178 ~ 13180272 (-)
G226124 NA other downstream 313749 13066873 ~ 13067357 (-)
G225171 LOC106605713 other downstream 908046 12472299 ~ 12473060 (-)
wu:fe05a04 LOC106578221 other upstream 539531 13909746 ~ 13927861 (-)
LOC110538195 LOC106578103 other upstream 612593 13995196 ~ 14023153 (-)
G227060 NA other upstream 1041650 14428793 ~ 14475166 (-)
psenen LOC106577931 other upstream 1136037 14519197 ~ 14524902 (-)
LOC110503689 tm149 other upstream 1211646 14598789 ~ 14638314 (-)

Expression


Co-expression Network