Gene
RNA
| Item | Value |
|---|---|
| gene id | G226240 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13251870 ~ 13252105 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258785 | True | 236 | lncRNA | 0.40 | 1 | 13251870 | 13252105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cxcr3.1 | cxcr3b | coding | downstream | 322806 | 12925454 ~ 12929064 (-) |
| LOC110503616 | LOC106605556 | coding | downstream | 368854 | 12880885 ~ 12883016 (-) |
| tlr21 | LOC106605556 | coding | downstream | 376182 | 12864942 ~ 12875688 (-) |
| LOC110509927 | LOC106578751 | coding | downstream | 391281 | 12856694 ~ 12860589 (-) |
| LOC110509869 | NA | coding | downstream | 487889 | 12761519 ~ 12763981 (-) |
| LOC110510146 | mrpl17 | coding | upstream | 87088 | 13339193 ~ 13341845 (-) |
| LOC110510138 | trp-ii | coding | upstream | 94004 | 13346109 ~ 13347872 (-) |
| LOC110503661 | trp-i | coding | upstream | 107777 | 13359882 ~ 13360962 (-) |
| LOC110510120 | LOC106577461 | coding | upstream | 124750 | 13376855 ~ 13378759 (-) |
| LOC110510106 | LOC106577440 | coding | upstream | 136304 | 13388409 ~ 13410671 (-) |
| G226239 | NA | non-coding | downstream | 129 | 13251528 ~ 13251741 (-) |
| G226238 | NA | non-coding | downstream | 532 | 13250933 ~ 13251338 (-) |
| G226237 | NA | non-coding | downstream | 1013 | 13250643 ~ 13250857 (-) |
| G226236 | NA | non-coding | downstream | 1658 | 13249927 ~ 13250212 (-) |
| G226234 | NA | non-coding | downstream | 3246 | 13248371 ~ 13248624 (-) |
| G226241 | NA | non-coding | upstream | 482 | 13252587 ~ 13252876 (-) |
| G226242 | NA | non-coding | upstream | 900 | 13253005 ~ 13253213 (-) |
| G226291 | NA | non-coding | upstream | 81109 | 13333214 ~ 13334359 (-) |
| G226206 | NA | non-coding | upstream | 90651 | 13342756 ~ 13343087 (-) |
| G226314 | tryp | non-coding | upstream | 129001 | 13381106 ~ 13387143 (-) |
| G226224 | NA | other | downstream | 27355 | 13223884 ~ 13224515 (-) |
| G226187 | NA | other | downstream | 71598 | 13177178 ~ 13180272 (-) |
| G226124 | NA | other | downstream | 184513 | 13066873 ~ 13067357 (-) |
| G225171 | LOC106605713 | other | downstream | 778810 | 12472299 ~ 12473060 (-) |
| G225127 | LOC106605865 | other | downstream | 794079 | 12454388 ~ 12457791 (-) |
| G226294 | LOC100136012 | other | upstream | 91969 | 13344074 ~ 13344375 (-) |
| wu:fe05a04 | LOC106578221 | other | upstream | 674569 | 13909746 ~ 13927861 (-) |
| LOC110538195 | LOC106578103 | other | upstream | 747631 | 13995196 ~ 14023153 (-) |
| G227060 | NA | other | upstream | 1176688 | 14428793 ~ 14475166 (-) |
| psenen | LOC106577931 | other | upstream | 1271075 | 14519197 ~ 14524902 (-) |
