Gene
RNA
| Item | Value |
|---|---|
| gene id | G226234 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13248371 ~ 13248624 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258779 | True | 254 | lncRNA | 0.32 | 1 | 13248371 | 13248624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cxcr3.1 | cxcr3b | coding | downstream | 319307 | 12925454 ~ 12929064 (-) |
| LOC110503616 | LOC106605556 | coding | downstream | 365355 | 12880885 ~ 12883016 (-) |
| tlr21 | LOC106605556 | coding | downstream | 372683 | 12864942 ~ 12875688 (-) |
| LOC110509927 | LOC106578751 | coding | downstream | 387782 | 12856694 ~ 12860589 (-) |
| LOC110509869 | NA | coding | downstream | 484390 | 12761519 ~ 12763981 (-) |
| LOC110510146 | mrpl17 | coding | upstream | 90569 | 13339193 ~ 13341845 (-) |
| LOC110510138 | trp-ii | coding | upstream | 97485 | 13346109 ~ 13347872 (-) |
| LOC110503661 | trp-i | coding | upstream | 111258 | 13359882 ~ 13360962 (-) |
| LOC110510120 | LOC106577461 | coding | upstream | 128231 | 13376855 ~ 13378759 (-) |
| LOC110510106 | LOC106577440 | coding | upstream | 139785 | 13388409 ~ 13410671 (-) |
| G226232 | NA | non-coding | downstream | 912 | 13247084 ~ 13247459 (-) |
| G226231 | NA | non-coding | downstream | 1481 | 13246553 ~ 13246890 (-) |
| G226226 | NA | non-coding | downstream | 21800 | 13226361 ~ 13226571 (-) |
| G226225 | NA | non-coding | downstream | 23030 | 13225042 ~ 13225341 (-) |
| G226223 | NA | non-coding | downstream | 24693 | 13223274 ~ 13223678 (-) |
| G226236 | NA | non-coding | upstream | 1303 | 13249927 ~ 13250212 (-) |
| G226237 | NA | non-coding | upstream | 2019 | 13250643 ~ 13250857 (-) |
| G226238 | NA | non-coding | upstream | 2309 | 13250933 ~ 13251338 (-) |
| G226239 | NA | non-coding | upstream | 2904 | 13251528 ~ 13251741 (-) |
| G226240 | NA | non-coding | upstream | 3246 | 13251870 ~ 13252105 (-) |
| G226224 | NA | other | downstream | 23856 | 13223884 ~ 13224515 (-) |
| G226187 | NA | other | downstream | 68099 | 13177178 ~ 13180272 (-) |
| G226124 | NA | other | downstream | 181014 | 13066873 ~ 13067357 (-) |
| G225171 | LOC106605713 | other | downstream | 775311 | 12472299 ~ 12473060 (-) |
| G225127 | LOC106605865 | other | downstream | 790580 | 12454388 ~ 12457791 (-) |
| G226294 | LOC100136012 | other | upstream | 95450 | 13344074 ~ 13344375 (-) |
| wu:fe05a04 | LOC106578221 | other | upstream | 678050 | 13909746 ~ 13927861 (-) |
| LOC110538195 | LOC106578103 | other | upstream | 751112 | 13995196 ~ 14023153 (-) |
| G227060 | NA | other | upstream | 1180169 | 14428793 ~ 14475166 (-) |
| psenen | LOC106577931 | other | upstream | 1274556 | 14519197 ~ 14524902 (-) |
