G225127 (LOC106605865)


Basic Information

Item Value
gene id G225127
gene name LOC106605865
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12454388 ~ 12457791 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257449
cgagggagggccaaacagaggagggcatggctactgactgagggagggccaaacagaggagggcatggctactgactgagggagggccaaacagaggagggcatggctactgaccgagggagggccaaacagaggagggcatggctactgactgagggagggccaaacagaggagggcatggctactgaccgagggagggccaaacagaggagggcatggctactgactgAGGGAGGGCCaaacaaaggggggaggggtgTGGACTCACCGACGGGGCTGAAGTTGAAGAGGAGGGGCAGTTCTCGTCCGCTGGGCAGATGGGCAGTGGGCTGGCGCAGCTCTTCGAAGAAGGCGTGGGCGCAGGCCTCCAGGGGGGATAGCCTAGTCACAGGGGTGTACTCTAACAGACGGGAACAGAGGGAGATGGCCTCTGGGGGGGTACGCGGCTTAAACACCTTTGTCCAGGGGTGTGCTTTGATCTGGGGGAATTTGAACTCTGTGTAGTTGGGGTTCATCTCTCGGATCTGCTCTCTCGTCGGAGTCCCCAAAACCTTGATGATCTCTACCAGTtggtccactccactgtccccgGGGAAGATGGGCTGTCCCAGCAGCAGTTCGGCCAGCACGCAGCCTGCTGACCAGATGTCAATGTTGGATGTGTAGTCCGTGGCGCCAAAGATGAGCTCAGGGGCACGGTAGTACCGCGAGCAGATATAGGACACGTTGGGCTCCCCGCGAACAAGCTGCTTAGC

Function

NR:

description
PREDICTED: glycogen synthase kinase-3 alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257449 True 756 TUCP 0.60 3 12454388 12457791

Neighbor

gene id symbol gene type direction distance location
LOC110509802 LOC106576373 coding downstream 15606 12432169 ~ 12438782 (-)
trnav-uac NA coding downstream 324142 12130171 ~ 12130246 (-)
LOC110509756 LOC106605861 coding downstream 341523 12111383 ~ 12112865 (-)
LOC110509720 LOC106576492 coding downstream 364917 12087174 ~ 12089471 (-)
LOC110503589 LOC106576508 coding downstream 367440 12077084 ~ 12086948 (-)
LOC110503604 LOC106605712 coding upstream 212698 12670489 ~ 12673805 (-)
LOC110505096 tigit coding upstream 230688 12688479 ~ 12690874 (-)
LOC110509848 LOC106575652 coding upstream 233841 12691632 ~ 12700659 (-)
LOC110505108 LOC106578919 coding upstream 269273 12727064 ~ 12732403 (-)
LOC118944453 LOC106605569 coding upstream 277962 12735753 ~ 12745687 (-)
G225124 LOC106576258 non-coding downstream 23440 12428828 ~ 12430948 (-)
G225148 NA non-coding downstream 39977 12413593 ~ 12414411 (-)
G225088 LOC106576393 non-coding downstream 93595 12355815 ~ 12360793 (-)
G225096 erf non-coding downstream 126321 12325864 ~ 12328067 (-)
G225061 NA non-coding downstream 146120 12266375 ~ 12308268 (-)
G225170 LOC106576357 non-coding upstream 12719 12470510 ~ 12472088 (-)
G225177 NA non-coding upstream 20473 12478264 ~ 12480006 (-)
G225193 NA non-coding upstream 66874 12524665 ~ 12524898 (-)
G225194 NA non-coding upstream 68164 12525955 ~ 12526228 (-)
G225195 NA non-coding upstream 68606 12526397 ~ 12526741 (-)
G225099 NA other downstream 113422 12336241 ~ 12340966 (-)
G224988 LOC106605856 other downstream 373155 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 438287 12014926 ~ 12016101 (-)
LOC110509592 LOC100136300 other downstream 645042 11808113 ~ 11811663 (-)
G224873 NA other downstream 658079 11795890 ~ 11796309 (-)
G225171 LOC106605713 other upstream 14508 12472299 ~ 12473060 (-)
G226124 NA other upstream 609082 13066873 ~ 13067357 (-)
G226187 NA other upstream 719387 13177178 ~ 13180272 (-)
G226224 NA other upstream 766093 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 886283 13344074 ~ 13344375 (-)

Expression


Co-expression Network