G226375



Basic Information


Item Value
gene id G226375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13492685 ~ 13493093 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU258940
ggtgggctatttaccaatagactatgtacagctgcagcgatcggttagctgctcagatagcagatgtttgaagttggtgagggagataaaagtctccaacttcagcgatttttgcaattcgttccagtcacaggcagcagagaactggaacgaaaggcggccaaatgaggtgttggctttagggatgatcagtgagatacacctgctggagcgcgtgctacggatgggtgttgccatcgtaaccagtgaactgagataaggcggagctttacctagcatggacttgtagatgacctagagccagtgggtctggcgacgaatatgtagcgagggccagccgactagagcatacaagtcgcagtggtgggtggtataaggtgctttagtgacaaaacggatggcactgtga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU258940 True 409 lncRNA 0.46 1 13492685 13493093

Neighbor


gene id symbol gene type direction distance location
LOC110510190 LOC106577499 coding downstream 10744 13480119 ~ 13481941 (-)
LOC110505114 NA coding downstream 18188 13463634 ~ 13474497 (-)
LOC110510175 LOC106577487 coding downstream 33637 13440784 ~ 13459048 (-)
LOC110510167 LOC106577478 coding downstream 53265 13435596 ~ 13439420 (-)
LOC110510106 LOC106577440 coding downstream 82014 13388409 ~ 13410671 (-)
LOC110510231 LOC106577531 coding upstream 65400 13558493 ~ 13678675 (-)
rs19 LOC100689943 coding upstream 225151 13718244 ~ 13723892 (-)
LOC110510240 LOC106577561 coding upstream 250440 13743533 ~ 13883559 (-)
LOC110510354 LOC106578237 coding upstream 393455 13886548 ~ 13902511 (-)
LOC110510306 LOC106578229 coding upstream 413252 13906345 ~ 13909374 (-)
G226374 NA non-coding downstream 273 13492151 ~ 13492412 (-)
G226372 NA non-coding downstream 4379 13488054 ~ 13488306 (-)
G226371 NA non-coding downstream 4968 13487006 ~ 13487717 (-)
G226361 NA non-coding downstream 30819 13461558 ~ 13461866 (-)
G226355 NA non-coding upstream 349 13493442 ~ 13494253 (-)
G226340 NA non-coding upstream 24631 13517724 ~ 13587278 (-)
G226338 apoa2 non-coding upstream 36538 13529631 ~ 13532702 (-)
G226389 NA non-coding upstream 47378 13540471 ~ 13541320 (-)
G226422 NA non-coding upstream 127462 13620555 ~ 13623391 (-)
G226294 LOC100136012 other downstream 148310 13344074 ~ 13344375 (-)
G226224 NA other downstream 268170 13223884 ~ 13224515 (-)
G226187 NA other downstream 312413 13177178 ~ 13180272 (-)
G226124 NA other downstream 425328 13066873 ~ 13067357 (-)
G225171 LOC106605713 other downstream 1019625 12472299 ~ 12473060 (-)
wu:fe05a04 LOC106578221 other upstream 433581 13909746 ~ 13927861 (-)
LOC110538195 LOC106578103 other upstream 506643 13995196 ~ 14023153 (-)
G227060 NA other upstream 935700 14428793 ~ 14475166 (-)
psenen LOC106577931 other upstream 1030087 14519197 ~ 14524902 (-)
LOC110503689 tm149 other upstream 1105696 14598789 ~ 14638314 (-)

Expression



Co-expression Network