G231679


Basic Information

Item Value
gene id G231679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18684112 ~ 18684718 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU264904
cacctattgctgctcattggaccctcattgcttctgaagctaagcagggttggtcctggtcagtccctggatgggagaccagatgctgctggaagtggtgttggagggccagtaggaggcactctttcctctggtctaaaaaaaaatatcccaatgccccagggcagtgattggggatattgccctgtgtagggtgccatctttcggatgggacgttaaacgggtgtcctgactctctgaggtcattaaagatcccatggcacttatcgtaagagtagggttgttaaccccggtgtcctggctaaattcccaatctgaccctcaaaccatcacggtcacctaataatccccagtttacaattggctcattcatccccctcctctcccctgtaactattccccaggtcgtttcTGCAAATgggaacgtgttctcagtcaacttacctggtaaaataacggataaataaaaataaataaataaatgatcacttggctacacatgcctctccctaatgtcaatatgccttgtctactgctgtgtcagttagttattattgttttatttcactgtagagcccccagcccCGCCTAACATtccttagatagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264904 True 607 lncRNA 0.47 1 18684112 18684718

Neighbor

gene id symbol gene type direction distance location
LOC110511375 NA coding downstream 7472 18633399 ~ 18676640 (-)
LOC110511506 lyric coding downstream 50865 18624581 ~ 18633247 (-)
laptm4b LOC106605533 coding downstream 59685 18612092 ~ 18624427 (-)
LOC110503735 LOC106605534 coding downstream 73236 18604759 ~ 18623150 (-)
LOC110511626 LOC106579251 coding downstream 325098 18353521 ~ 18359014 (-)
LOC110511352 LOC106605528 coding upstream 12619 18697337 ~ 18706474 (-)
LOC110511312 LOC106605543 coding upstream 109267 18793985 ~ 18797369 (-)
LOC110511207 oxr1 coding upstream 142161 18826879 ~ 19024152 (-)
LOC110511176 LOC106579058 coding upstream 380794 19065512 ~ 19282368 (-)
rims2a LOC106579570 coding upstream 731336 19416054 ~ 19652601 (-)
G231677 NA non-coding downstream 2824 18681037 ~ 18681288 (-)
G231649 NA non-coding downstream 88616 18594986 ~ 18595496 (-)
G231648 NA non-coding downstream 90830 18593036 ~ 18593282 (-)
G231646 NA non-coding downstream 92433 18591471 ~ 18591679 (-)
G231686 NA non-coding upstream 25374 18710092 ~ 18710295 (-)
G231753 NA non-coding upstream 130093 18814811 ~ 18815043 (-)
G231755 NA non-coding upstream 131653 18816371 ~ 18816870 (-)
G231756 NA non-coding upstream 132325 18817043 ~ 18817417 (-)
G231757 NA non-coding upstream 132822 18817540 ~ 18818396 (-)
G231652 rn146 other downstream 82237 18599730 ~ 18601875 (-)
LOC110503747 lars2 other downstream 553058 18093704 ~ 18154474 (-)
LOC110505118 LOC106579600 other downstream 706203 17975160 ~ 17985544 (-)
G229707 NA other downstream 1635768 17043792 ~ 17048344 (-)
G229380 LOC106605502 other downstream 1833913 16849972 ~ 16850199 (-)
G232980 NA other upstream 963368 19648086 ~ 19648629 (-)
G233052 LOC106605397 other upstream 1071486 19756204 ~ 19757908 (-)
G233513 LOC106561082 other upstream 1867065 20551783 ~ 20551997 (-)

Expression


Co-expression Network